Gene Psyr_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2091 
Symbol 
ID3367605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2440196 
End bp2441185 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID637652440 
Productesterase/lipase/thioesterase family protein 
Protein accessionYP_235172 
Protein GI66045331 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.226093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00381064 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAGCA GCAGCCAGCT TTTTCCCGTG GCCTTGATCA GCGCCGAGCG TCGTGGCGAT 
CTGGTCGAGG ACGTCTACCG TCTCAAACCT GCCAACAGTC CCGACGCCAG TGTCGAACTC
GCGGTAACCC GGCTGGGGCG GGCCGATCAG CCCGACGTGC GTGGCACTCC GGTCATCCTG
CTGCATGGCA GCTTTTCCAA CCGGCGTTTC TGGTATTCGC CCAAGGGCAT CGGTCTGGGC
GCGTATCTGG CGCGTGCCGG TTATGACGTG TGGATTCCTG AAATGCGCGG CCATGGCCTG
TCGGCTCGCA ACCTGAGTTA CCGCAGCAAT TGCGTGGCGG ACTACGCGCG TTTCGATTTG
CCAGCCATTG CCGCGTTCAT CGTCGAGCAA AGTGGCCAGA TACCGCACTG GATCGGCCAT
TCGCTGGGCG GCACGAGCCT GGCGGCAGCC TTGGGCGGTC AGTACCTGGG GGCTGATACT
GCGGCGTCCG TGGCGCTGTT CGGCAGCCAG GTCAGCCGTA CCTACTGGCC GCTAAAGGTC
CCGCCACTGC AATGGTCTGC GAAGTGGCTG TTGAGGTCTT TCGAGCATAT CTCCGGACCG
CGTTTCAAGC GCGGGCCGGA AGACGAGCCG ATCGGTCTGG TTCTGGAAAG CATGCGTTGG
CACGGGTTGT TCGGGCGTTT CGGTGAGCGT GACAACAACT GGTGGGCAGG GTTGAGCGCG
GTTCAGGTGC CGCTTCTGGC TGTCGCTGCG GCGGGCGACC ATCAGGATCC GGTGTGGGCT
TGCCGTGAGC TGTTCGAGCA GATCGGCAGC GAACACAGGC AGTTTCTCTG CCTGAGCCGT
GAACACGGCT TCAGCGAGGA TTTCGACCAT GTGCAGATGC TGGTCAGCAA GGCTGCGCAG
CAGCAGGTCT GGCCGCGAGT GATCGAGTGG CTGGGTGAGT GTTCCGTTCC TGAACAGGTT
GCAGAGTTTC AGGTCGCGGT GGGCAGTTAG
 
Protein sequence
MQSSSQLFPV ALISAERRGD LVEDVYRLKP ANSPDASVEL AVTRLGRADQ PDVRGTPVIL 
LHGSFSNRRF WYSPKGIGLG AYLARAGYDV WIPEMRGHGL SARNLSYRSN CVADYARFDL
PAIAAFIVEQ SGQIPHWIGH SLGGTSLAAA LGGQYLGADT AASVALFGSQ VSRTYWPLKV
PPLQWSAKWL LRSFEHISGP RFKRGPEDEP IGLVLESMRW HGLFGRFGER DNNWWAGLSA
VQVPLLAVAA AGDHQDPVWA CRELFEQIGS EHRQFLCLSR EHGFSEDFDH VQMLVSKAAQ
QQVWPRVIEW LGECSVPEQV AEFQVAVGS