Gene Psyr_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2089 
Symbol 
ID3367603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2436588 
End bp2437406 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content56% 
IMG OID637652438 
Producthypothetical protein 
Protein accessionYP_235170 
Protein GI66045329 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0035036 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGAT CCGCTTTCTT CATCTCGGAC GGCACGGGTA TCACCGCCGA AACCCTGGGC 
CAGAGCCTGT TGGCACAATT TGAAAACATT ACCTTCAACA AGTTCACCAG GCCCTATATC
GACAGCGTCG AGAAGGCGCG GGCGATGGTA CAGCAAATCA ATAATGCCGC CGACAAGGAC
GATGTGCGGC CGATCATCTT CGATACCATC GTCAATCAGG ACATTCGCGA GATTCTGGCG
ACGTCCAATG GCTTCATGAT CGATATCTTT TCGACCTTCC TGGCCCCGCT GGAGCAGGAG
CTTAGTTCAC ACTCGTCCTA CTCCGTGGGT AAATCGCATT CGATCGGGCA TAACTCCAAT
TACATGGAGC GCATCGAGGC GGTCAACTTC GCGCTGGACA ACGATGACGG CGCGCGGACG
CATTATTACG ACAAGGCCGA TATCATCCTC GTCGGCGTCT CGCGCTGCGG CAAAACCCCG
ACCTGTCTGT ACATGGCCAT GCAGTTCGGT ATCCGCGCCG CCAACTATCC GCTGACCGAA
GATGATATGG AAAGGCTGCA ACTGCCTGCA GCGCTCAAGC AGCATCGCGA AAAACTGTTC
GGCCTGACCA TCGACCCGGA CCGCCTCACC GCGATCCGCC ACGAGCGCAA GCCCAACAGC
CGCTACTCCA GCTACGCGCA GTGCGAATTC GAGGTGCGCG AGGTGGAAAG CCTGTTCCGC
CGCGAGAACA TTGCACACAT CAACTCCACG CATTTTTCGG TGGAAGAAAT CTCCGCCAAG
GTGCTGGTCG AAAAAGGCGT GGAGCGACGT TTCAAGTAG
 
Protein sequence
MKRSAFFISD GTGITAETLG QSLLAQFENI TFNKFTRPYI DSVEKARAMV QQINNAADKD 
DVRPIIFDTI VNQDIREILA TSNGFMIDIF STFLAPLEQE LSSHSSYSVG KSHSIGHNSN
YMERIEAVNF ALDNDDGART HYYDKADIIL VGVSRCGKTP TCLYMAMQFG IRAANYPLTE
DDMERLQLPA ALKQHREKLF GLTIDPDRLT AIRHERKPNS RYSSYAQCEF EVREVESLFR
RENIAHINST HFSVEEISAK VLVEKGVERR FK