Gene Psyr_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2062 
Symbol 
ID3367576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2409356 
End bp2409790 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content61% 
IMG OID637652411 
ProductDoxD-like family protein 
Protein accessionYP_235143 
Protein GI66045302 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.697173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAT TGATCAAGTC GGTCCTCACC ACTCGCGCCG GTTACGGCCT GACTGTCCTG 
CGCGTCATCG TCGGTATCGC GTTCATCGCG CACGGCAGCC AGAAACTGTT CGGCGCCTTC
GGTGGTTATG GCCTCGAAGG CACTGCGCAG TACATGGAAA GCCTGGGCCT GACGCCGGGT
TACCTGATGG CGCTGATGTC GGGCAGCGCC GAATTCTTTG GCGGCCTGGG CCTGCTGCTG
GGGTTGCTGG CTCGTCCTGC TGCGGTCGTG GTGATCCTGT TGTTGCTGGT GGCGATCTTC
ACCGTGCATA TCCACAACGG CTTCTTCATG GCCAACAACG GCTACGAGTA CGCGCTGGCA
CTGCTCGGCG GTGCCGTGGC AGTACTCATC GAAGGTGCAG GCAAGTTTTC GCTGGACCGT
ATCATCGGCC GATAA
 
Protein sequence
MNTLIKSVLT TRAGYGLTVL RVIVGIAFIA HGSQKLFGAF GGYGLEGTAQ YMESLGLTPG 
YLMALMSGSA EFFGGLGLLL GLLARPAAVV VILLLLVAIF TVHIHNGFFM ANNGYEYALA
LLGGAVAVLI EGAGKFSLDR IIGR