Gene Psyr_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2048 
Symbol 
ID3367562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2391814 
End bp2393892 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content63% 
IMG OID637652397 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_235129 
Protein GI66045288 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0440524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.433607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAC CTATTAATCC TGCAAAAAAT GCTGCTGCGA AATCTACTGA ATCGCAGGCC 
ACCGAGTCGG CAAAAACCGG CATCGCCGCC CTGTGGCGTC CGGCGCTGGT GCAGGCGTTC
GTCAAGCTCG ACCCGCGTCA GCTCAAGCGT TCGCCGGTCA TGCTGGTGGT GGAACTGACC
GCCATTCTGA CCACCGTGTT GTGCGTGATC CCCAACCCGC AGGTGCCGAC TTCGGTTTGC
GTGCAGATCG CCCTGTGGCT GTGGTTCACC GTGCTGTTCG CCAACTTCGC CGAAGCGCTG
GCCGAAGGCC GCGGCAAGGC CCGCGCCGAC AGCCTCAAGG CGGGCAGCGA AGGGCTCAAG
GCACGTATCA GGGACGACAA TGGCAGCCTG CGCATCATCA ATGCCAGCGA GTTGCGCAAG
GGTGATGTGG TGCGCGTCGA GATCGGCGAA ATGATTCCCG GTGATGGCGA AGTCATCGAG
GGCATCGCGG CGGTCAACGA GGCTGCGATT ACCGGCGAAT CCGCACCAGT GATCCGCGAA
TCCGGTGGTG ACCGCTCGGC CGTGACCGGC AACACCCGGC TGGTCTCCGA CTGGCTGCTG
ATCCGCATCA GCGCCAACCC CGGCGAGTCG ACACTGGACC GCATGATCGC GCTGGTCGAA
GGCGCCAAGC GGCAAAAGAC CCCCAATGAG GTCGCGCTGG ATATTCTGCT GATCGGCCTG
ACCCTGATCT TCCTGCTGGT GGTCATCACC TTGCAGCCGT TCGCCCACTT CGCCGGTGGC
AGCCTGCCGC TGGTGTTTCT GGTGGCGTTG CTGGTCACGC TGATCCCCAC CACCATTGGC
GGTCTGCTGT CGGCCATCGG CATTGCCGGC ATGGACCGCC TGGTGCGCCT CAATGTGATT
GCCAAGTCCG GTCGCGCCGT GGAAGCCGCG GGCGATGTGC ATGTGCTGCT GCTGGACAAG
ACCGGCACCA TCACCTTCGG CAACCGTCGC TGCGCCGCGG TCTACGCTGC ACCGGGCGTG
ACCCCGAAGG AACTGGGCGA GGGTGCTTTG CTGGCCTCGC TGGCCGACGA CACGGCAGAA
GGCAAATCCA TCGTCGAGTT CCTGCGCAAT CTGCACCCGA TGAACGAGCC GGCCCTGAGC
TCGGTGACTG CCGTGCCGTT CAGCGCTGAT ACGCGTCTGT CCGGCGTTGA TTATCAGGGC
CACGTGTACC GCAAGGGTGC AGTGGATTCG CTGTTGGCCT TCATCGACAT GCAGCGCAGC
GAGCTGCCGC CTGTACTGGC CCGTGAAGTC GACAAGATTG CCAAGACCGG CGGTACGCCG
CTGCTGGTCT GCGCCAACGG TCGGTTGCTG GGCGCGATCC ATCTCAAGGA CGTGGTCAAG
CCGGGTATTC GCGAACGTTT CGAAGAGCTG CGCAAACTGG GTATCCGCAC CGTGATGGTC
ACCGGCGATA ACCCGTTGAC TGCCGCAGCG ATTGCCGCCG AGGCCGGTGT CGACGACGTT
CTGGCTGAAG CCACACCGGA GAAAAAACTG GAGCGGATTC GCCAGGAGCA GGGCGAAGGG
CGGCTGGTGG CGATGTGCGG CGACGGTGCC AACGATGCGC CCGCACTGGC CCAGGCCGAT
GTCGGCATGG CGATGAACGA CGGCACTCAG GCGGCACGCG AAGCGGCGAA CATGGTTGAC
CTCGACAGCG ACCCGACCAA GTTGCTGGAC GTGGTGCAGA TCGGCAAGGA GTTGCTGGTT
ACCCGCGGTG CGCTGACCAC CTTTTCGATT GCCAACGACG TGGCCAAGTA CTTCGCGGTA
CTGCCTGCGC TGTTTGCCTC GATCTACCCG CAACTGGGTG TGCTCAACGT CATGAAGCTG
ACCAGCCCGC AGAGCGCGAT TGTCTCGGCC ATCGTCTTCA ACGCGCTGAT CATCGTCGTG
CTGATCCCGC TGGCCCTGCG CGGCGTGCGT GTACAGGCGG CCAGCGCGGC TCACTTGTTG
CGTCGCAACC TGCTGATCTA TGGCCTGGGC GGCATCGTTG TGCCGTTTAT CGGCATCAAG
CTGATCGACA TGCTGCTGGT CGCACTCGGC CTTGTTTGA
 
Protein sequence
MNLPINPAKN AAAKSTESQA TESAKTGIAA LWRPALVQAF VKLDPRQLKR SPVMLVVELT 
AILTTVLCVI PNPQVPTSVC VQIALWLWFT VLFANFAEAL AEGRGKARAD SLKAGSEGLK
ARIRDDNGSL RIINASELRK GDVVRVEIGE MIPGDGEVIE GIAAVNEAAI TGESAPVIRE
SGGDRSAVTG NTRLVSDWLL IRISANPGES TLDRMIALVE GAKRQKTPNE VALDILLIGL
TLIFLLVVIT LQPFAHFAGG SLPLVFLVAL LVTLIPTTIG GLLSAIGIAG MDRLVRLNVI
AKSGRAVEAA GDVHVLLLDK TGTITFGNRR CAAVYAAPGV TPKELGEGAL LASLADDTAE
GKSIVEFLRN LHPMNEPALS SVTAVPFSAD TRLSGVDYQG HVYRKGAVDS LLAFIDMQRS
ELPPVLAREV DKIAKTGGTP LLVCANGRLL GAIHLKDVVK PGIRERFEEL RKLGIRTVMV
TGDNPLTAAA IAAEAGVDDV LAEATPEKKL ERIRQEQGEG RLVAMCGDGA NDAPALAQAD
VGMAMNDGTQ AAREAANMVD LDSDPTKLLD VVQIGKELLV TRGALTTFSI ANDVAKYFAV
LPALFASIYP QLGVLNVMKL TSPQSAIVSA IVFNALIIVV LIPLALRGVR VQAASAAHLL
RRNLLIYGLG GIVVPFIGIK LIDMLLVALG LV