Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2042 |
Symbol | |
ID | 3367556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2378885 |
End bp | 2384074 |
Gene Length | 5190 bp |
Protein Length | 1729 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637652391 |
Product | hypothetical protein |
Protein accession | YP_235123 |
Protein GI | 66045282 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.291825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTT ATTCAGCGGA AAGTCTGCTG GCATGGATGA AAAATACCAC GCGTCTCAGA GGCTGGGACG CGATCATTGC TCTGGATGGC GACAAGGTCA ACGAGCTGCT GGAACATGTT TACCAACAGG GTGTGGCTCA GGGGCTGTCG CGTCCGGTGC CGGACGGAAG TATCACGATT CCCGATACGC ATGATGCTCA TTTTTTCTCG GGTTGTGTTC TCGGGGCGCC GACCTTGTCG TTCAAGGACA GTGTTCTGGG ACATTCCCTG CTGGCCTGGC GCCTGCCAGT TATCGCCGGC ATGCATACCG TGGTAGAGAG CGCTCAGGGA CAGCACAATG TTCACAGAAT CGCTGCCTAC GATCCGCTGA ACGCGCCGGA CCTGGATTTC GATCTGGAAC TGAATAGTCA AAGCGCGGAT CTGGTGGTAG AGCTTGGCCT GGCTAAAAAC CTTTCGCTGG ATTTTCCGGG CGGTTCTACT GAACGCAGCA AGATCGGCGA GTTTTTTCAA GGTTGGTTGA GCAACCCTGA AAATCAGGAG CAGAGGTTAA GGCTGGGTAT TTTCAATGAG CAGAGCAACG AATTGCTCAA CGTGCGCAGA ATTGATGTGC GGTCACAGCT GGAAAGCCCC GATGCTGTAT CGGTCCATAA AAAAGGCGCC TTGTTGCTGT TCACGACCCT GGAGTACGGG GTGACGGGCG GGATTCCGGA TGGCGATTCT GACTTTCGTT ACCTGATTCC CAACGATGCT CAGCATTCGT ACTCGGCGAC CGCCGTGTTT TCCTCCCACG CGTTGCACCG CGCTGCCTTT GGTGGTGCGG TGATACAAAT GCTGCAAGCG CCCGACTTCA GCTTCATCGT TCCGGAGGAT AAACCGCTGC AGCGAATGGT CGCTCAGGCC GGTACTTTTG CAGTACCGGC CGGAGACTAC CGGAGCGCAG AATTTGTCTT CGAATCCGAA CCTTTCAGTG TCCAGGCCTT CAACGCCCAG CATCCCCTGA CCATTGATTT CGAGTACGCC CAGACTACGC AGACCTGGGA ATTCCCCTGC ACGCTGGGTT TTCGCTACAG GGCGCTGGAC AGCGATCAAT GGCAATCGCA CAACGCTACC TTCAACATCA GCCTCAAGCA CGAGTTTCAT CTGATTGAAA GTGAGTCAGA TGATCAGGCA GTGGAAGGGC ATCTTTATGC ACCTTACCTC TTCGACCATG AAGTCAGCGC CGCTCCAGGA ACGCTGGACA ACCTGAGTGC CAGAGAACTT GAGCAGATCA ACGGCTTCGT GGCCTATACC GTCAAACACG CCTTGCTTCA AGGGTTGAGC AAAACCCTGG ATGCCACCGG CGCCGAGCGC TTTCTGGCCG GCTGGTCATT GCCTGACGAG CAAGTGCTGC AACCCGTACT CAAACGTCTG CCTTATGACC TCGCGTTGTT CGGTCGTATC GATCCCGCTG CGTCCACGTT CAGTATCGTC GAGCAACAGG CACTGATCAG TACAGGCGAA ACGCTGCAAT TGACCACCCG GCCTGCGCGC CCGGGCATCG TCTGGTCGCT GGCAAATCCA TTGGATGGCG GTACTGACGG TCTGGGGGAA ATTGATGCGC AGGGTCGGTA TGTGGCTCCC GCAGCACTGC CCGTGAGGCA GGGTTTTCAG CGTGTACTGA TCAAGGCGAT GGACCCCGTG TCGGGGCATG GCAGTACCGC AGTGTTGACG GTGCTCACCA GCAGCGTCAG CGTCAGCCCG TTGATTCAGG TGTGTAATTA CGGTCAACGG ATAGCGCTTT CAGCACGCAG TTCGCGCGCA GGCAACCTGA AATGGACGGT GGTCGATCCG GTGCCCGGAC AAAGCGGGAC GCTTGAGGAT GGCGTCGATG CGCCGCATGA AAAATTTTAC GTCGCCGGTG CAGGGGGGGC AGGGAATACC TATGTCCTTG ACACAATAAC GGTCAGCGAT GACCAGCACA CCGAATCAAT CCAGGTACTG GTTCTTCGCC ACTCACCGAT GCTGCCCATC ACGCTTGCCA GCGTCAATGA CCAGCGTGCC GAGCTGACAG TCGTCGTCAA TGGCCACAAG CTTCCAGTCA CCTGGCGTCT GAGCGGGCCG GGCTCCATAG ACGCCGCGGG TGTGTACAGC AGCGATTCCA ACGCACCCGA ACGCTTCGTT GTCGTGTTCG CAGAAATTAT GGACGAGTAC CTTGGCACGA TGGCCGGACA CCTGATTCTG CCGCTGCCAT TGAGTGGCTC CTCCGGTGTA TTGCAGGCAC TGACCGGCCC CGCGCTGGGC ACGGCGGGTA ATACAATGCC CCGTTCACTG AGCGCTATTG TGCAGCAAGC CGGTGCAGGT ACCTTGACCC AGGGCTGGGG AGCCGTCGCG GCGGTCAGTC GCAGCGATCT CAACCGGCAT ATCGAGCAGC AATACATCGA GCGCTATCGG GAGCTGGCCT TCTTGCCGTT GTTCACCGGT GAAATTGTGG TGGATGAGCG ACAAGGCGAC ACTGTTCGTC TGAAGCAGGT CGTACTGGGT GTGCCGGTTC TGTCGTTTGT GGCTGACTCG GCGGGCTCCA GCAGTGTTCT TGTCACGATG AACATCGTGT CGGGCCGTTA CAGCGGCTTG CATCAGCCGC AGGGCAGCGC AACCACCGTG TCCGGCAGCT TCATCATCAG CGAGCCCATG GGCTTCAGGC TGGCGATGAC GGTCGATCTC TTCGTGGGAG AGGAGGGGCA TGTGCTGCTC GATCTGGCTG ACGGGGCTGG CGTTGCCTGT AATCTGGGCG GCGTCGATGA TGCGATCAAT CAGGCACTGG CAGATTTCTT TGCCCGGGAG TTCAAGCAGG TTGCGCTTCA TTGCCGGGTT TTCTCAGTCC TGCAGGCACA GCTCAATCGT TATCATGTTC AGACGCCAAC CCGCTTGCGG CTCCTTACCC GCGCCGCGCC GCGTTCAAGC GACGCGCGCA TGGACAACGC GGGTGATGGC GCGCTTATGC TGTTCATGCA AGCGCAGGAT AGCGAAGCTG AAGGCTTGTT TCCGTCGGCA GATAATTTCG TTTATCCGAT ACCTGATGAT CGCGGGGCAG ACAGTCAGCC AGCATACGGC ACGGTGTTGA TGCTCTCGCA AGAGACTCAG TCGATGGTCG AGCGTGAACG CTTGCAGGTG CTGGACAGCC TGAAGTTCAG CGGTGGACGA GTATTTGAAC CGCTTGAGCG ACACTGCCCG CACGACCTGT TGTTGTTTGG CAGCCTTCGT TCAACACAGG CCAGCATTAC ACCGCTGTTC TCGACTGTAA CGGCCGGGCA GACCCAGCGC TTTGTCCTGC ACAACCCGCA AGGCGAAGAA ATACCGGCCA CCAGCTGGAG TGCATTAAGC ATTCAAAGCC ACGTGGCTGC CGGAAGCGGC AGCATCTCTT CCAGCGGCGT TTACACGGCG GCGGGCCTTG AGGCTATCGG CCATGACGCG CTGCGCGTCG TGATCACTGC CGTCTATCAA GAGTCAGGCG CTGTCGTCAA GGTCTCGGCG CTGGTGAGTG TGGTATCGCG GAGCCTGGAG TTGGCGCCAC GTGTAACGGT GGTGCCAAGG GGGACTGCGC TGCAACCGGT CTCGCTGGCG GCTTCGACGC ATGACGGCAG CCCGGTGAGC TGGGCGCTGC TGGGGGCGGA GCTTGGCAGG TTGAGTGAGG TCGGCAAGGG CGCGCTCTTC AGTCCGGATG CCAGGTCCGG TAAAAGAGCG CTGGCCGTGC AACAGATAGA GGCGTCGGGC AATGACCTTG GCATCGCTAC GGTGCTTGTC GCCAACGGGC AGCAAATGCT GCACATCGAG CCGGCTTTTG TACCCAGAGC ACGACCAAAG GTAGCGGTGC AGTTACAGGA TGACCGCTCA CTGCTGCCCG GGCTTGAGCG ACGCTGGAAG GTGGTGGGTG GGGCCGGCAC TGTTGATCGG CAGGGGCTTT TCATGCCGCC CGACCAGGCG CTTGTCGCCA GTAGCGTGGT GAGCTGTGAA GTGGTGAACA ACGGGGTGGT TCTGGCGTGT GGCTATAGCG TCATCGAATT GTCCGAAGTC ATCGATGAAG GTACTTGGAC CGAACTGTCG ATGTTTACCA TCACGGTCCC CGGCTCGCCA TCGACTGAAA ATAATACGGG TATTCTGTAC CCCAATGGCT ATCAGCAACT CAGGCTGCAG ATCAAGACCC AGGTGATGCC GGTCGACGGT GTCGATTACG AGCTGAGCCC CGCCGAAAGG CTCACCATGC GCCTGGTAGA CGATGGCACC CAGCAAGAAA TCGAGACAGT AGCCCTCCAT CTCGATGGCA TGTCTGAAGA TGATGAGCAG ACGTGGCGCG TGCGTAGTCA ACATAACCGC TTCGAGTTGT CCGGGGCCGG CGTTTTCGCT GCTGAGCCGG GCCTGGATGC GTCACGGCCA GTCGTGCAGG ACTTCTATCT GCACAGTCGA CAGGAATCGG GTTCAGTCAG CGTCTTCTAC GCGAGATTTC AGGATGCCAA CGACAATTGG TGGAACTCTG TGCGGTATGA AGAAGTGAAC AGCACGGTCG AAATCACCCC GCGACGCTTG CCCTCGTTCG ATAACCAGAA TTACAACTTC ATTCCGCAGC GTGCCGAGGG GTTAGGCGGA AATCCTCCGG CCGAGCCGCC TGCGGAAGGG GCTCCGGATG ACCCTTTCGA CTTCAATCTC AACACCATCG ATTACTGGAA GCTGAGTGCC GTCAACCCCG ATACCCAGCA ATGGGTAGGT TTCGAGAGGC TGAAGTTTAT GCCCTCCAAG CCTGGCAGTG ACGTGATCAA TACCTCGATC ATTCTCTGGG AGAGCGAACA GGTAGAAGAA AAAATGTTCA GTTGGACGGG TTTTATCTTC GACGACCCGG CTGATGACGG CGATGTGAGC AAGGTGCACT TTGACGAAGC GCTGAAAGAC GTGATGGGGG CCGATCACTC GTTGGACATC GACGTCAATA TGCAGCTATT CGAGACCGGC AAACTGATCA TCAGCCTGCA CCGCCTCCGG GGTCTTAAAT TCATCCCGAA AGGTCATCCT GCACGCGACA AGTTGACGGG AACATTAGCC GTCCTGTTGA TCGATAAGCA GGGCAATGCC CATAAACGGC GAATCAGTTT TCTGGCCGAG GGCCCCGGCA GGCGCAACCG TCTCATGCAT ACCTTCTATT CGGCAACTCG GTCCGAATGA
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Protein sequence | MAGYSAESLL AWMKNTTRLR GWDAIIALDG DKVNELLEHV YQQGVAQGLS RPVPDGSITI PDTHDAHFFS GCVLGAPTLS FKDSVLGHSL LAWRLPVIAG MHTVVESAQG QHNVHRIAAY DPLNAPDLDF DLELNSQSAD LVVELGLAKN LSLDFPGGST ERSKIGEFFQ GWLSNPENQE QRLRLGIFNE QSNELLNVRR IDVRSQLESP DAVSVHKKGA LLLFTTLEYG VTGGIPDGDS DFRYLIPNDA QHSYSATAVF SSHALHRAAF GGAVIQMLQA PDFSFIVPED KPLQRMVAQA GTFAVPAGDY RSAEFVFESE PFSVQAFNAQ HPLTIDFEYA QTTQTWEFPC TLGFRYRALD SDQWQSHNAT FNISLKHEFH LIESESDDQA VEGHLYAPYL FDHEVSAAPG TLDNLSAREL EQINGFVAYT VKHALLQGLS KTLDATGAER FLAGWSLPDE QVLQPVLKRL PYDLALFGRI DPAASTFSIV EQQALISTGE TLQLTTRPAR PGIVWSLANP LDGGTDGLGE IDAQGRYVAP AALPVRQGFQ RVLIKAMDPV SGHGSTAVLT VLTSSVSVSP LIQVCNYGQR IALSARSSRA GNLKWTVVDP VPGQSGTLED GVDAPHEKFY VAGAGGAGNT YVLDTITVSD DQHTESIQVL VLRHSPMLPI TLASVNDQRA ELTVVVNGHK LPVTWRLSGP GSIDAAGVYS SDSNAPERFV VVFAEIMDEY LGTMAGHLIL PLPLSGSSGV LQALTGPALG TAGNTMPRSL SAIVQQAGAG TLTQGWGAVA AVSRSDLNRH IEQQYIERYR ELAFLPLFTG EIVVDERQGD TVRLKQVVLG VPVLSFVADS AGSSSVLVTM NIVSGRYSGL HQPQGSATTV SGSFIISEPM GFRLAMTVDL FVGEEGHVLL DLADGAGVAC NLGGVDDAIN QALADFFARE FKQVALHCRV FSVLQAQLNR YHVQTPTRLR LLTRAAPRSS DARMDNAGDG ALMLFMQAQD SEAEGLFPSA DNFVYPIPDD RGADSQPAYG TVLMLSQETQ SMVERERLQV LDSLKFSGGR VFEPLERHCP HDLLLFGSLR STQASITPLF STVTAGQTQR FVLHNPQGEE IPATSWSALS IQSHVAAGSG SISSSGVYTA AGLEAIGHDA LRVVITAVYQ ESGAVVKVSA LVSVVSRSLE LAPRVTVVPR GTALQPVSLA ASTHDGSPVS WALLGAELGR LSEVGKGALF SPDARSGKRA LAVQQIEASG NDLGIATVLV ANGQQMLHIE PAFVPRARPK VAVQLQDDRS LLPGLERRWK VVGGAGTVDR QGLFMPPDQA LVASSVVSCE VVNNGVVLAC GYSVIELSEV IDEGTWTELS MFTITVPGSP STENNTGILY PNGYQQLRLQ IKTQVMPVDG VDYELSPAER LTMRLVDDGT QQEIETVALH LDGMSEDDEQ TWRVRSQHNR FELSGAGVFA AEPGLDASRP VVQDFYLHSR QESGSVSVFY ARFQDANDNW WNSVRYEEVN STVEITPRRL PSFDNQNYNF IPQRAEGLGG NPPAEPPAEG APDDPFDFNL NTIDYWKLSA VNPDTQQWVG FERLKFMPSK PGSDVINTSI ILWESEQVEE KMFSWTGFIF DDPADDGDVS KVHFDEALKD VMGADHSLDI DVNMQLFETG KLIISLHRLR GLKFIPKGHP ARDKLTGTLA VLLIDKQGNA HKRRISFLAE GPGRRNRLMH TFYSATRSE
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