Gene Psyr_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2042 
Symbol 
ID3367556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2378885 
End bp2384074 
Gene Length5190 bp 
Protein Length1729 aa 
Translation table11 
GC content58% 
IMG OID637652391 
Producthypothetical protein 
Protein accessionYP_235123 
Protein GI66045282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.291825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTT ATTCAGCGGA AAGTCTGCTG GCATGGATGA AAAATACCAC GCGTCTCAGA 
GGCTGGGACG CGATCATTGC TCTGGATGGC GACAAGGTCA ACGAGCTGCT GGAACATGTT
TACCAACAGG GTGTGGCTCA GGGGCTGTCG CGTCCGGTGC CGGACGGAAG TATCACGATT
CCCGATACGC ATGATGCTCA TTTTTTCTCG GGTTGTGTTC TCGGGGCGCC GACCTTGTCG
TTCAAGGACA GTGTTCTGGG ACATTCCCTG CTGGCCTGGC GCCTGCCAGT TATCGCCGGC
ATGCATACCG TGGTAGAGAG CGCTCAGGGA CAGCACAATG TTCACAGAAT CGCTGCCTAC
GATCCGCTGA ACGCGCCGGA CCTGGATTTC GATCTGGAAC TGAATAGTCA AAGCGCGGAT
CTGGTGGTAG AGCTTGGCCT GGCTAAAAAC CTTTCGCTGG ATTTTCCGGG CGGTTCTACT
GAACGCAGCA AGATCGGCGA GTTTTTTCAA GGTTGGTTGA GCAACCCTGA AAATCAGGAG
CAGAGGTTAA GGCTGGGTAT TTTCAATGAG CAGAGCAACG AATTGCTCAA CGTGCGCAGA
ATTGATGTGC GGTCACAGCT GGAAAGCCCC GATGCTGTAT CGGTCCATAA AAAAGGCGCC
TTGTTGCTGT TCACGACCCT GGAGTACGGG GTGACGGGCG GGATTCCGGA TGGCGATTCT
GACTTTCGTT ACCTGATTCC CAACGATGCT CAGCATTCGT ACTCGGCGAC CGCCGTGTTT
TCCTCCCACG CGTTGCACCG CGCTGCCTTT GGTGGTGCGG TGATACAAAT GCTGCAAGCG
CCCGACTTCA GCTTCATCGT TCCGGAGGAT AAACCGCTGC AGCGAATGGT CGCTCAGGCC
GGTACTTTTG CAGTACCGGC CGGAGACTAC CGGAGCGCAG AATTTGTCTT CGAATCCGAA
CCTTTCAGTG TCCAGGCCTT CAACGCCCAG CATCCCCTGA CCATTGATTT CGAGTACGCC
CAGACTACGC AGACCTGGGA ATTCCCCTGC ACGCTGGGTT TTCGCTACAG GGCGCTGGAC
AGCGATCAAT GGCAATCGCA CAACGCTACC TTCAACATCA GCCTCAAGCA CGAGTTTCAT
CTGATTGAAA GTGAGTCAGA TGATCAGGCA GTGGAAGGGC ATCTTTATGC ACCTTACCTC
TTCGACCATG AAGTCAGCGC CGCTCCAGGA ACGCTGGACA ACCTGAGTGC CAGAGAACTT
GAGCAGATCA ACGGCTTCGT GGCCTATACC GTCAAACACG CCTTGCTTCA AGGGTTGAGC
AAAACCCTGG ATGCCACCGG CGCCGAGCGC TTTCTGGCCG GCTGGTCATT GCCTGACGAG
CAAGTGCTGC AACCCGTACT CAAACGTCTG CCTTATGACC TCGCGTTGTT CGGTCGTATC
GATCCCGCTG CGTCCACGTT CAGTATCGTC GAGCAACAGG CACTGATCAG TACAGGCGAA
ACGCTGCAAT TGACCACCCG GCCTGCGCGC CCGGGCATCG TCTGGTCGCT GGCAAATCCA
TTGGATGGCG GTACTGACGG TCTGGGGGAA ATTGATGCGC AGGGTCGGTA TGTGGCTCCC
GCAGCACTGC CCGTGAGGCA GGGTTTTCAG CGTGTACTGA TCAAGGCGAT GGACCCCGTG
TCGGGGCATG GCAGTACCGC AGTGTTGACG GTGCTCACCA GCAGCGTCAG CGTCAGCCCG
TTGATTCAGG TGTGTAATTA CGGTCAACGG ATAGCGCTTT CAGCACGCAG TTCGCGCGCA
GGCAACCTGA AATGGACGGT GGTCGATCCG GTGCCCGGAC AAAGCGGGAC GCTTGAGGAT
GGCGTCGATG CGCCGCATGA AAAATTTTAC GTCGCCGGTG CAGGGGGGGC AGGGAATACC
TATGTCCTTG ACACAATAAC GGTCAGCGAT GACCAGCACA CCGAATCAAT CCAGGTACTG
GTTCTTCGCC ACTCACCGAT GCTGCCCATC ACGCTTGCCA GCGTCAATGA CCAGCGTGCC
GAGCTGACAG TCGTCGTCAA TGGCCACAAG CTTCCAGTCA CCTGGCGTCT GAGCGGGCCG
GGCTCCATAG ACGCCGCGGG TGTGTACAGC AGCGATTCCA ACGCACCCGA ACGCTTCGTT
GTCGTGTTCG CAGAAATTAT GGACGAGTAC CTTGGCACGA TGGCCGGACA CCTGATTCTG
CCGCTGCCAT TGAGTGGCTC CTCCGGTGTA TTGCAGGCAC TGACCGGCCC CGCGCTGGGC
ACGGCGGGTA ATACAATGCC CCGTTCACTG AGCGCTATTG TGCAGCAAGC CGGTGCAGGT
ACCTTGACCC AGGGCTGGGG AGCCGTCGCG GCGGTCAGTC GCAGCGATCT CAACCGGCAT
ATCGAGCAGC AATACATCGA GCGCTATCGG GAGCTGGCCT TCTTGCCGTT GTTCACCGGT
GAAATTGTGG TGGATGAGCG ACAAGGCGAC ACTGTTCGTC TGAAGCAGGT CGTACTGGGT
GTGCCGGTTC TGTCGTTTGT GGCTGACTCG GCGGGCTCCA GCAGTGTTCT TGTCACGATG
AACATCGTGT CGGGCCGTTA CAGCGGCTTG CATCAGCCGC AGGGCAGCGC AACCACCGTG
TCCGGCAGCT TCATCATCAG CGAGCCCATG GGCTTCAGGC TGGCGATGAC GGTCGATCTC
TTCGTGGGAG AGGAGGGGCA TGTGCTGCTC GATCTGGCTG ACGGGGCTGG CGTTGCCTGT
AATCTGGGCG GCGTCGATGA TGCGATCAAT CAGGCACTGG CAGATTTCTT TGCCCGGGAG
TTCAAGCAGG TTGCGCTTCA TTGCCGGGTT TTCTCAGTCC TGCAGGCACA GCTCAATCGT
TATCATGTTC AGACGCCAAC CCGCTTGCGG CTCCTTACCC GCGCCGCGCC GCGTTCAAGC
GACGCGCGCA TGGACAACGC GGGTGATGGC GCGCTTATGC TGTTCATGCA AGCGCAGGAT
AGCGAAGCTG AAGGCTTGTT TCCGTCGGCA GATAATTTCG TTTATCCGAT ACCTGATGAT
CGCGGGGCAG ACAGTCAGCC AGCATACGGC ACGGTGTTGA TGCTCTCGCA AGAGACTCAG
TCGATGGTCG AGCGTGAACG CTTGCAGGTG CTGGACAGCC TGAAGTTCAG CGGTGGACGA
GTATTTGAAC CGCTTGAGCG ACACTGCCCG CACGACCTGT TGTTGTTTGG CAGCCTTCGT
TCAACACAGG CCAGCATTAC ACCGCTGTTC TCGACTGTAA CGGCCGGGCA GACCCAGCGC
TTTGTCCTGC ACAACCCGCA AGGCGAAGAA ATACCGGCCA CCAGCTGGAG TGCATTAAGC
ATTCAAAGCC ACGTGGCTGC CGGAAGCGGC AGCATCTCTT CCAGCGGCGT TTACACGGCG
GCGGGCCTTG AGGCTATCGG CCATGACGCG CTGCGCGTCG TGATCACTGC CGTCTATCAA
GAGTCAGGCG CTGTCGTCAA GGTCTCGGCG CTGGTGAGTG TGGTATCGCG GAGCCTGGAG
TTGGCGCCAC GTGTAACGGT GGTGCCAAGG GGGACTGCGC TGCAACCGGT CTCGCTGGCG
GCTTCGACGC ATGACGGCAG CCCGGTGAGC TGGGCGCTGC TGGGGGCGGA GCTTGGCAGG
TTGAGTGAGG TCGGCAAGGG CGCGCTCTTC AGTCCGGATG CCAGGTCCGG TAAAAGAGCG
CTGGCCGTGC AACAGATAGA GGCGTCGGGC AATGACCTTG GCATCGCTAC GGTGCTTGTC
GCCAACGGGC AGCAAATGCT GCACATCGAG CCGGCTTTTG TACCCAGAGC ACGACCAAAG
GTAGCGGTGC AGTTACAGGA TGACCGCTCA CTGCTGCCCG GGCTTGAGCG ACGCTGGAAG
GTGGTGGGTG GGGCCGGCAC TGTTGATCGG CAGGGGCTTT TCATGCCGCC CGACCAGGCG
CTTGTCGCCA GTAGCGTGGT GAGCTGTGAA GTGGTGAACA ACGGGGTGGT TCTGGCGTGT
GGCTATAGCG TCATCGAATT GTCCGAAGTC ATCGATGAAG GTACTTGGAC CGAACTGTCG
ATGTTTACCA TCACGGTCCC CGGCTCGCCA TCGACTGAAA ATAATACGGG TATTCTGTAC
CCCAATGGCT ATCAGCAACT CAGGCTGCAG ATCAAGACCC AGGTGATGCC GGTCGACGGT
GTCGATTACG AGCTGAGCCC CGCCGAAAGG CTCACCATGC GCCTGGTAGA CGATGGCACC
CAGCAAGAAA TCGAGACAGT AGCCCTCCAT CTCGATGGCA TGTCTGAAGA TGATGAGCAG
ACGTGGCGCG TGCGTAGTCA ACATAACCGC TTCGAGTTGT CCGGGGCCGG CGTTTTCGCT
GCTGAGCCGG GCCTGGATGC GTCACGGCCA GTCGTGCAGG ACTTCTATCT GCACAGTCGA
CAGGAATCGG GTTCAGTCAG CGTCTTCTAC GCGAGATTTC AGGATGCCAA CGACAATTGG
TGGAACTCTG TGCGGTATGA AGAAGTGAAC AGCACGGTCG AAATCACCCC GCGACGCTTG
CCCTCGTTCG ATAACCAGAA TTACAACTTC ATTCCGCAGC GTGCCGAGGG GTTAGGCGGA
AATCCTCCGG CCGAGCCGCC TGCGGAAGGG GCTCCGGATG ACCCTTTCGA CTTCAATCTC
AACACCATCG ATTACTGGAA GCTGAGTGCC GTCAACCCCG ATACCCAGCA ATGGGTAGGT
TTCGAGAGGC TGAAGTTTAT GCCCTCCAAG CCTGGCAGTG ACGTGATCAA TACCTCGATC
ATTCTCTGGG AGAGCGAACA GGTAGAAGAA AAAATGTTCA GTTGGACGGG TTTTATCTTC
GACGACCCGG CTGATGACGG CGATGTGAGC AAGGTGCACT TTGACGAAGC GCTGAAAGAC
GTGATGGGGG CCGATCACTC GTTGGACATC GACGTCAATA TGCAGCTATT CGAGACCGGC
AAACTGATCA TCAGCCTGCA CCGCCTCCGG GGTCTTAAAT TCATCCCGAA AGGTCATCCT
GCACGCGACA AGTTGACGGG AACATTAGCC GTCCTGTTGA TCGATAAGCA GGGCAATGCC
CATAAACGGC GAATCAGTTT TCTGGCCGAG GGCCCCGGCA GGCGCAACCG TCTCATGCAT
ACCTTCTATT CGGCAACTCG GTCCGAATGA
 
Protein sequence
MAGYSAESLL AWMKNTTRLR GWDAIIALDG DKVNELLEHV YQQGVAQGLS RPVPDGSITI 
PDTHDAHFFS GCVLGAPTLS FKDSVLGHSL LAWRLPVIAG MHTVVESAQG QHNVHRIAAY
DPLNAPDLDF DLELNSQSAD LVVELGLAKN LSLDFPGGST ERSKIGEFFQ GWLSNPENQE
QRLRLGIFNE QSNELLNVRR IDVRSQLESP DAVSVHKKGA LLLFTTLEYG VTGGIPDGDS
DFRYLIPNDA QHSYSATAVF SSHALHRAAF GGAVIQMLQA PDFSFIVPED KPLQRMVAQA
GTFAVPAGDY RSAEFVFESE PFSVQAFNAQ HPLTIDFEYA QTTQTWEFPC TLGFRYRALD
SDQWQSHNAT FNISLKHEFH LIESESDDQA VEGHLYAPYL FDHEVSAAPG TLDNLSAREL
EQINGFVAYT VKHALLQGLS KTLDATGAER FLAGWSLPDE QVLQPVLKRL PYDLALFGRI
DPAASTFSIV EQQALISTGE TLQLTTRPAR PGIVWSLANP LDGGTDGLGE IDAQGRYVAP
AALPVRQGFQ RVLIKAMDPV SGHGSTAVLT VLTSSVSVSP LIQVCNYGQR IALSARSSRA
GNLKWTVVDP VPGQSGTLED GVDAPHEKFY VAGAGGAGNT YVLDTITVSD DQHTESIQVL
VLRHSPMLPI TLASVNDQRA ELTVVVNGHK LPVTWRLSGP GSIDAAGVYS SDSNAPERFV
VVFAEIMDEY LGTMAGHLIL PLPLSGSSGV LQALTGPALG TAGNTMPRSL SAIVQQAGAG
TLTQGWGAVA AVSRSDLNRH IEQQYIERYR ELAFLPLFTG EIVVDERQGD TVRLKQVVLG
VPVLSFVADS AGSSSVLVTM NIVSGRYSGL HQPQGSATTV SGSFIISEPM GFRLAMTVDL
FVGEEGHVLL DLADGAGVAC NLGGVDDAIN QALADFFARE FKQVALHCRV FSVLQAQLNR
YHVQTPTRLR LLTRAAPRSS DARMDNAGDG ALMLFMQAQD SEAEGLFPSA DNFVYPIPDD
RGADSQPAYG TVLMLSQETQ SMVERERLQV LDSLKFSGGR VFEPLERHCP HDLLLFGSLR
STQASITPLF STVTAGQTQR FVLHNPQGEE IPATSWSALS IQSHVAAGSG SISSSGVYTA
AGLEAIGHDA LRVVITAVYQ ESGAVVKVSA LVSVVSRSLE LAPRVTVVPR GTALQPVSLA
ASTHDGSPVS WALLGAELGR LSEVGKGALF SPDARSGKRA LAVQQIEASG NDLGIATVLV
ANGQQMLHIE PAFVPRARPK VAVQLQDDRS LLPGLERRWK VVGGAGTVDR QGLFMPPDQA
LVASSVVSCE VVNNGVVLAC GYSVIELSEV IDEGTWTELS MFTITVPGSP STENNTGILY
PNGYQQLRLQ IKTQVMPVDG VDYELSPAER LTMRLVDDGT QQEIETVALH LDGMSEDDEQ
TWRVRSQHNR FELSGAGVFA AEPGLDASRP VVQDFYLHSR QESGSVSVFY ARFQDANDNW
WNSVRYEEVN STVEITPRRL PSFDNQNYNF IPQRAEGLGG NPPAEPPAEG APDDPFDFNL
NTIDYWKLSA VNPDTQQWVG FERLKFMPSK PGSDVINTSI ILWESEQVEE KMFSWTGFIF
DDPADDGDVS KVHFDEALKD VMGADHSLDI DVNMQLFETG KLIISLHRLR GLKFIPKGHP
ARDKLTGTLA VLLIDKQGNA HKRRISFLAE GPGRRNRLMH TFYSATRSE