| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2037 |
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| Symbol | |
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| ID | 3367551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2364893 |
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| End bp | 2367406 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652386 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_235118 |
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| Protein GI | 66045277 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.367837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.304513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTAT TACCCGATTC CGGGTTCATA CCAGTGCGCC TGCGCTTTAT GCAGGTGCTG
ATTGTGTGCG GCAGCGTTAC CGTACCGCTG GAACTGACCA AGGCGGCAAC CCCTGTCAAG
TTCCAGTCCG GCTTCCTGCG TCAGGGCCAG GACTATGACA GTGAGGCCGC GGCCAGCGTG
CTGAACCAGT TGTCAGTTGT CGAAAACCTC GGGCCAGGCG ATCACTGGGT AGAAATCCAC
GTCAATATGC GCCATTTCGG CCAACGGCAG ATCCGTTTCG ATGCCGACCC ACAAGGCAAC
GGCCTGCTGC CCTGCCTGTC GCGGGAACTG CTGGAGCAGA TCGGCGTACG CCTCGACAGT
CTGGCCGACC CGGCCTTGTT GCAAGTCGCT TGTGTCGCGC TGGGGCAATT GATTCCGGAC
GCCAAGGTCG TACTGGACGG CGGCAGACTG CAACTGTCGA TCTCGATACC GCAGATCGCC
ATGCGCCGCG ACGCCAACGG GCGAGTGGAC CCGGCGCTTT GGGATTACGG CATCAACGCC
GCCTTCATCA ATTACCAGAC CTCGGCGCAA CAGACGACCC ATAGGGAAAC AGGCACCAGC
AGCAGCGCAG ACCTGTACCT AAACACCGGT ATCAACCTGG GGTCATGGCG ATTGCGCAGC
AATCAAAGCG TGCGTCAGGA TGCACAGGGA CATCGCGAGT GGACCAGAGC CTACGCTTAT
GCACAGCGCG ACCTGCCCGG CACCCACGCT AACCTGACCC TCGGTGAAAC CTACACCGGC
GGCGATGTCT TCCGGAGCGT GCCGATCAAG GGCGGGTTGA TCAAAACCGA TCAGGAGATG
CTCCCCGATT CCCTGCAGGG TTACGCACCG GTGATCCGTG GCGTTGCGCA AAGCAGGGCC
AAACTGGAAG TCCTGCAGAA CGGATACCCG ATCTACTCCA CGTATGTCAG TGCCGGCCCC
TATGAAATAG ATGACCTGAA CACGGCGGGC AGCGGCGAAC TGGAGATCGT GCTGACCGAG
GCCGATGGTC AGGTGCGGCG CTTTACCCAA CCTTACTCGA CCATGAGTAA CCTGTTGCGC
GAAGGCGTCT GGAAATACAG CGCAGCCCTG GGCCGCTTCA ACGGTGCCTA CGCCACCGAC
CATCCCTGGC TATGGCAAGG CACGCTGGCC GTTGGCACAG GCTGGAACTC GACACTTTAT
GGCGGACTGA TGACCAGCGA CTTCTACCAT GCCGCAGCGC TGGGCGTGTC ACGGGACATG
GGCATGCTGG GAGCGATGGC GTTCGATGTG ACCCGGTCAC GCGCCGGCAT CGATCAGCCC
GGTCAGTCCA GCGTGCAGGG CATGAGTTAC GCCATCAAGT ACGGCAAGGC GTTCACTACC
CATACCAATC TGCGCTTCGC AGGTTATCGC TACTCCACCG CAGGCTATCG GGATTTCGAC
GAAGCCGTCA GTCAGCGCAG CAACGACGAT GCGTTCAGGG GTAGCCGCCG AAGCCGACTG
GAGGCTTCGA TTCATCAGAG AATCGGCGCA CGCAGCAGCG TCGGTCTTAC GCTGTCGCAA
CAGAATTACT GGGGGAGCGA TATCGAGCAA CGACAATTTC AGTTCAACTT CAACACCCAT
CGTGCCGGGA TAACCTATAA CTTCTACGCC TCACAGTCGC TGAGCGTAGC CAGTAACCGC
GGCAACGACC GGCAGTTCGG CCTGAGCATC TCGATGCCCC TCGACACCGG CCATTCGAGC
AATGCCACAC TCGACCTGCA GAGCAGCGCC AATCGCCACA GTCAACGGGG CAGCCTGAGC
GGCAGCCTCT ACGAAAACCG GGTCAATTAT CACGCCAGCC TGAGCAACGA TGACGGCAAG
CAGCAAAGTG CCAGCCTTGC GGCGGGCTAT CAGGCGCCCT TCGCCAGCCT CGGCGCCGGT
GTAACTCAGG GCAATGATTA TCGAAGTACA TCAGTCAATG CCAGTGGCGC CTTGTTGCTG
CATGCCGACG GCATCGAGTT CGGCCCGAAT CTGGGTGACA CCATCGCCCT GGTCGAAGTG
CCCGATACAC CAGGCGTGGG CATACAGAAC GCGACCGGTG TCAGGACCAA TAGTCGTGGC
TACGCATTGA TGCCCTATCT GCGCCCCTAC CGCTATAACC CGATCGCCTT GCAGACCGAC
CGGCTTGGCC CCGAGGTGGA AATCGATAAC GCCAGTGCTC AAGTGGTGCC TGCCAGGGGT
GCCGTGATCA AGACCACCTT CGCTGCACGC ACGGTGACAC GCCTGGTCAT CAATGCAACC
ACTCCCAGTG GCAAGCCGCT GCCATTCGGC GCCCGGGTCA GCGACGCGCA GGGCAACATC
CTGGGCATCG CAGGCCAGGG CGGGCAGATT TTGCTGTCCA CCGACATGCA GGCACAAACC
CTCGATGTCC ACTGGGGAGA GAAAAGCGAC CCTCAGTGTC GTCTGCACAT AGACCCCGCT
GGCATGCCTT TGGCCCAGGG CTACCGAATG CAGGACATGA CGTGTACCCA GTGA
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| Protein sequence | MTLLPDSGFI PVRLRFMQVL IVCGSVTVPL ELTKAATPVK FQSGFLRQGQ DYDSEAAASV
LNQLSVVENL GPGDHWVEIH VNMRHFGQRQ IRFDADPQGN GLLPCLSREL LEQIGVRLDS
LADPALLQVA CVALGQLIPD AKVVLDGGRL QLSISIPQIA MRRDANGRVD PALWDYGINA
AFINYQTSAQ QTTHRETGTS SSADLYLNTG INLGSWRLRS NQSVRQDAQG HREWTRAYAY
AQRDLPGTHA NLTLGETYTG GDVFRSVPIK GGLIKTDQEM LPDSLQGYAP VIRGVAQSRA
KLEVLQNGYP IYSTYVSAGP YEIDDLNTAG SGELEIVLTE ADGQVRRFTQ PYSTMSNLLR
EGVWKYSAAL GRFNGAYATD HPWLWQGTLA VGTGWNSTLY GGLMTSDFYH AAALGVSRDM
GMLGAMAFDV TRSRAGIDQP GQSSVQGMSY AIKYGKAFTT HTNLRFAGYR YSTAGYRDFD
EAVSQRSNDD AFRGSRRSRL EASIHQRIGA RSSVGLTLSQ QNYWGSDIEQ RQFQFNFNTH
RAGITYNFYA SQSLSVASNR GNDRQFGLSI SMPLDTGHSS NATLDLQSSA NRHSQRGSLS
GSLYENRVNY HASLSNDDGK QQSASLAAGY QAPFASLGAG VTQGNDYRST SVNASGALLL
HADGIEFGPN LGDTIALVEV PDTPGVGIQN ATGVRTNSRG YALMPYLRPY RYNPIALQTD
RLGPEVEIDN ASAQVVPARG AVIKTTFAAR TVTRLVINAT TPSGKPLPFG ARVSDAQGNI
LGIAGQGGQI LLSTDMQAQT LDVHWGEKSD PQCRLHIDPA GMPLAQGYRM QDMTCTQ
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