Gene Psyr_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2029 
Symbol 
ID3367543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2353322 
End bp2354368 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content63% 
IMG OID637652378 
Producthypothetical protein 
Protein accessionYP_235110 
Protein GI66045269 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.850073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACA ATGACCGTCT GTTGGTGCAG ATTCTGCTGC TGGCGCTGTT TGGTGCCTGC 
CTCTGGGTGA TGGCGCCGTT CTGGTCGGCG CTGGTCTGGG GCGCGGTACT GGCCTTCGCC
AGCTGGCCGC TGATGCGTTT GCTGACCCGC TGGTTCAAGG GCCGTGAGTC GCTGGCTGCG
CTGGTGATGT GCCTGTGCTG GATGCTGCTG GTCGCGGCGC CGCTGGTGTG GCTGGGCTTC
AATCTCGCCG ACCATGTGCG TGACGCCACG GGCCTGATCA AGGACATTCA GGTCGACGGC
TTGCCCGATC CACCGCAATG GCTGGCGGGT ATTCCGCTGG TGGGCGAAAG ACTGGTAGCG
CTGTGGACCA CCATCGATCA GCAAGGCGCG GCATTCATGG CGACGCTCAA GCCGCATCTG
GGTCAGGTCG GTAACTGGAT TCTGGCACGC AGTGCGCAGA TCGGCAGCGG GATTCTGGAG
CTGACCCTGA GCATCGTCTT CGCCTTCTTC TTCTACAGGG ACGGTCCGCG GCTGGCCGCC
TTCGTGCTCA GCCTGCTGGA ACGCCTGATC GGGGAGCGCG CCCAGTATTA TCTGGATCTG
GTCGCCGGCA CGGTGCAACG CGTAGTCAAC GGGGTCATCG GTACGGCAGC GGCCCAGGCG
GTGCTGGCGC TGATCGGCTT CCTGATCGCG GGCATTCCCG GTGCACTGGT GCTGGGGATT
CTGACCTTTC TGTTCAGTCT GATTCCGATG GGCCCGCCCT TGGTCTGGCT GCCTGCCACT
GCCTGGCTGG TCTGGCAGGG CGAGTACGGC ATGGCGATAT TTCTGGGCAT CTGGGGGATG
TTCATCATCA GTGGCGTGGA CAACGTGCTC AAGCCATATC TGATCAGCAG GGGCGGCAAT
CTACCGCTGG TGATTGTCTT GCTGGGTGTG TTCGGAGGCT TGCTGGCCTT TGGCTTCATC
GGCCTGTTCA TCGGCCCGAC GCTGCTGGCA GTCGCTTACA GCCTGTTGAC CGACTGGGTC
GGCAGCGAGC GTGCCCGCAG CCGCTGA
 
Protein sequence
MFNNDRLLVQ ILLLALFGAC LWVMAPFWSA LVWGAVLAFA SWPLMRLLTR WFKGRESLAA 
LVMCLCWMLL VAAPLVWLGF NLADHVRDAT GLIKDIQVDG LPDPPQWLAG IPLVGERLVA
LWTTIDQQGA AFMATLKPHL GQVGNWILAR SAQIGSGILE LTLSIVFAFF FYRDGPRLAA
FVLSLLERLI GERAQYYLDL VAGTVQRVVN GVIGTAAAQA VLALIGFLIA GIPGALVLGI
LTFLFSLIPM GPPLVWLPAT AWLVWQGEYG MAIFLGIWGM FIISGVDNVL KPYLISRGGN
LPLVIVLLGV FGGLLAFGFI GLFIGPTLLA VAYSLLTDWV GSERARSR