Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2019 |
Symbol | |
ID | 3367533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2343838 |
End bp | 2345061 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652368 |
Product | 3-oxoacyl-(acyl carrier protein) synthase I |
Protein accession | YP_235100 |
Protein GI | 66045259 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.383938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.898727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCGCG TCGTTATCAC TGGTCTGGGT ATTGTTTCCT GCTTGGGCAA TGACAAAGAC ACCGTCACCG CTAACCTGCG TGCTAACCGC CCTGGCATCC GCTTCAACCC GGAATATGCC GAAATGGGTC TGCGTAGCCA GGTTTCCGGC TCCATCGACC TGAATCTGGA AGAACTGATC GATCGCAAGA TCTTCCGCTT CGTCGGCCAT GCGGCAGCCT ATGCCTATCT GGCGATGAAA GACGCCATTA CCGATTCGGG CCTGACCGAC GAGCAGGTTT CCAACGTGCG TACCGGTCTG ATCGCCGGCA GCGGCGGCGC CTCGACCCTG AACCAGATGG AAGCGCTGGA TACCCTGCGT GAAAAAGGCG TCAAGCGTGT CGGCCCTTAC CGCGTCACGC GGACCATGGG CAGCACCGTT TCGGCCTGCC TGGCCACGCC GTTCAAGATC AAGGGTGTGA ACTACTCCAT CTCGTCCGCC TGCGCCACCA GCGCACACTG CATCGGCAAC GCTGTCGAGC AGATCCAGCT GGGCAAGCAG GACATCGTCT TTGCCGGTGG CGGCGAAGAA GAGCACTGGA GCCAGTCGTT CCTGTTCGAC GCGATGGGCG CGCTGTCCAC CCAGTACAAC GAGACGCCGG AAAAAGCCTC GCGTGCCTAC GATGCCAAGC GTGACGGTTT CGTCATTGCC GGTGGTGGCG GCATGGTGGT TGTCGAAGAA CTCGAACACG CTCTGGCGCG TGGCGCGAAG ATCTACGCAG AAATCGTCGG TTACGGCGCG ACCTCCGATG GCTACGACAT GGTCGCACCC AGCGGTGAAG GTGCCATTCG TTGCATGAAG ATGGCGCTGG GCGATATCGA CTCCGGTGCC ATTGACTACA TCAACACCCA TGGCACCTCG ACCCCGGTCG GCGACGCCAA GGAAATGGAG GGCGTGCGCG AAGTATTCGG CGCCAACGCT CCGGCGATCA GCTCCACCAA GAGCCTGTCG GGCCACTCGC TGGGCGCCGC AGGTGTCCAC GAAGCGATCT ACTGCCTGCT GATGATGGAG AACAACTTCA TCGCAGGTTC GGCCAACATC GACGAGCTGG ACCCGGTGGT TGCCGACATG CCTATCCTGC TCAAGACCCA GGAAGATGCG AAGCTCGATC TGGTCATGAG CAACAGCTTC GGCTTCGGCG GCACCAACGC CACGCTGGTG TTGAAACGCT GGGCGGGCAA GTAA
|
Protein sequence | MRRVVITGLG IVSCLGNDKD TVTANLRANR PGIRFNPEYA EMGLRSQVSG SIDLNLEELI DRKIFRFVGH AAAYAYLAMK DAITDSGLTD EQVSNVRTGL IAGSGGASTL NQMEALDTLR EKGVKRVGPY RVTRTMGSTV SACLATPFKI KGVNYSISSA CATSAHCIGN AVEQIQLGKQ DIVFAGGGEE EHWSQSFLFD AMGALSTQYN ETPEKASRAY DAKRDGFVIA GGGGMVVVEE LEHALARGAK IYAEIVGYGA TSDGYDMVAP SGEGAIRCMK MALGDIDSGA IDYINTHGTS TPVGDAKEME GVREVFGANA PAISSTKSLS GHSLGAAGVH EAIYCLLMME NNFIAGSANI DELDPVVADM PILLKTQEDA KLDLVMSNSF GFGGTNATLV LKRWAGK
|
| |