Gene Psyr_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2019 
Symbol 
ID3367533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2343838 
End bp2345061 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content61% 
IMG OID637652368 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_235100 
Protein GI66045259 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.383938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.898727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG TCGTTATCAC TGGTCTGGGT ATTGTTTCCT GCTTGGGCAA TGACAAAGAC 
ACCGTCACCG CTAACCTGCG TGCTAACCGC CCTGGCATCC GCTTCAACCC GGAATATGCC
GAAATGGGTC TGCGTAGCCA GGTTTCCGGC TCCATCGACC TGAATCTGGA AGAACTGATC
GATCGCAAGA TCTTCCGCTT CGTCGGCCAT GCGGCAGCCT ATGCCTATCT GGCGATGAAA
GACGCCATTA CCGATTCGGG CCTGACCGAC GAGCAGGTTT CCAACGTGCG TACCGGTCTG
ATCGCCGGCA GCGGCGGCGC CTCGACCCTG AACCAGATGG AAGCGCTGGA TACCCTGCGT
GAAAAAGGCG TCAAGCGTGT CGGCCCTTAC CGCGTCACGC GGACCATGGG CAGCACCGTT
TCGGCCTGCC TGGCCACGCC GTTCAAGATC AAGGGTGTGA ACTACTCCAT CTCGTCCGCC
TGCGCCACCA GCGCACACTG CATCGGCAAC GCTGTCGAGC AGATCCAGCT GGGCAAGCAG
GACATCGTCT TTGCCGGTGG CGGCGAAGAA GAGCACTGGA GCCAGTCGTT CCTGTTCGAC
GCGATGGGCG CGCTGTCCAC CCAGTACAAC GAGACGCCGG AAAAAGCCTC GCGTGCCTAC
GATGCCAAGC GTGACGGTTT CGTCATTGCC GGTGGTGGCG GCATGGTGGT TGTCGAAGAA
CTCGAACACG CTCTGGCGCG TGGCGCGAAG ATCTACGCAG AAATCGTCGG TTACGGCGCG
ACCTCCGATG GCTACGACAT GGTCGCACCC AGCGGTGAAG GTGCCATTCG TTGCATGAAG
ATGGCGCTGG GCGATATCGA CTCCGGTGCC ATTGACTACA TCAACACCCA TGGCACCTCG
ACCCCGGTCG GCGACGCCAA GGAAATGGAG GGCGTGCGCG AAGTATTCGG CGCCAACGCT
CCGGCGATCA GCTCCACCAA GAGCCTGTCG GGCCACTCGC TGGGCGCCGC AGGTGTCCAC
GAAGCGATCT ACTGCCTGCT GATGATGGAG AACAACTTCA TCGCAGGTTC GGCCAACATC
GACGAGCTGG ACCCGGTGGT TGCCGACATG CCTATCCTGC TCAAGACCCA GGAAGATGCG
AAGCTCGATC TGGTCATGAG CAACAGCTTC GGCTTCGGCG GCACCAACGC CACGCTGGTG
TTGAAACGCT GGGCGGGCAA GTAA
 
Protein sequence
MRRVVITGLG IVSCLGNDKD TVTANLRANR PGIRFNPEYA EMGLRSQVSG SIDLNLEELI 
DRKIFRFVGH AAAYAYLAMK DAITDSGLTD EQVSNVRTGL IAGSGGASTL NQMEALDTLR
EKGVKRVGPY RVTRTMGSTV SACLATPFKI KGVNYSISSA CATSAHCIGN AVEQIQLGKQ
DIVFAGGGEE EHWSQSFLFD AMGALSTQYN ETPEKASRAY DAKRDGFVIA GGGGMVVVEE
LEHALARGAK IYAEIVGYGA TSDGYDMVAP SGEGAIRCMK MALGDIDSGA IDYINTHGTS
TPVGDAKEME GVREVFGANA PAISSTKSLS GHSLGAAGVH EAIYCLLMME NNFIAGSANI
DELDPVVADM PILLKTQEDA KLDLVMSNSF GFGGTNATLV LKRWAGK