Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2018 |
Symbol | |
ID | 3367532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2342589 |
End bp | 2343317 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637652367 |
Product | dienelactone hydrolase |
Protein accession | YP_235099 |
Protein GI | 66045258 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.426068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.85232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCA CTATCGAAAT TCGTTCTGTG GTCTATCAGA TTGATGGTCA ATCTTATGAA AGCCGCCTGG TATACGACAC AAAAGCGACT GCTGCACAGC CAGGTCTGTT GATGGCGCCC AACTGGATGG GTGTCAGCCA GGGTGCCGAA GACATTGCCA AAGCCGTGGC CGAGAAGGGC TACGTGGTAT TGCTGGCTGA TCTTTATGGC CAGCAGATTC GCCCGAGTAA CAATGACGAA GCAGGCGCCG CCATGACGCC GCTGAAGAAC GACCGTGGTT TGTTGCGCAA GCGCATGCAG GCAGGTCTCG ATCAGTTGCT GAGTCAGGCG GATGTTTCGC TGGATGTAAG CAGAATCGCA ACGTTCGGCT TCTGCTTTGG CGGCTGCTGC TCGCTGGAGC TGGCGCGTAC CGGTGCCGAG CTGAAAGCCG CGATTTCCTT CCACGGCACG CTGGACACAC CCAATCCGGC TGACGCCAAA AACATCAAGG GCTCGGTGCT GGTCCTGCAC GGTGCTTCTG ACCCGTTGGT GCCGAAAGAG CAACTGCCGG CTTTCGAAGA TGAAATGAAC GCCGCTGGCG TGGACTGGCA GCTATACAGC TACGGCGGCG CATTCCATTC CTTCACCGAT CCGCACGCCA ACGTGCCGGG GATGATGATG TACGATCCCA AAGTGTCGAG TCGCGCGTTC AAGTCCATGC ATGACCTGCT GAACGAAGTG TTCGGCTGA
|
Protein sequence | MSSTIEIRSV VYQIDGQSYE SRLVYDTKAT AAQPGLLMAP NWMGVSQGAE DIAKAVAEKG YVVLLADLYG QQIRPSNNDE AGAAMTPLKN DRGLLRKRMQ AGLDQLLSQA DVSLDVSRIA TFGFCFGGCC SLELARTGAE LKAAISFHGT LDTPNPADAK NIKGSVLVLH GASDPLVPKE QLPAFEDEMN AAGVDWQLYS YGGAFHSFTD PHANVPGMMM YDPKVSSRAF KSMHDLLNEV FG
|
| |