Gene Psyr_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2018 
Symbol 
ID3367532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2342589 
End bp2343317 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID637652367 
Productdienelactone hydrolase 
Protein accessionYP_235099 
Protein GI66045258 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.426068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.85232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CTATCGAAAT TCGTTCTGTG GTCTATCAGA TTGATGGTCA ATCTTATGAA 
AGCCGCCTGG TATACGACAC AAAAGCGACT GCTGCACAGC CAGGTCTGTT GATGGCGCCC
AACTGGATGG GTGTCAGCCA GGGTGCCGAA GACATTGCCA AAGCCGTGGC CGAGAAGGGC
TACGTGGTAT TGCTGGCTGA TCTTTATGGC CAGCAGATTC GCCCGAGTAA CAATGACGAA
GCAGGCGCCG CCATGACGCC GCTGAAGAAC GACCGTGGTT TGTTGCGCAA GCGCATGCAG
GCAGGTCTCG ATCAGTTGCT GAGTCAGGCG GATGTTTCGC TGGATGTAAG CAGAATCGCA
ACGTTCGGCT TCTGCTTTGG CGGCTGCTGC TCGCTGGAGC TGGCGCGTAC CGGTGCCGAG
CTGAAAGCCG CGATTTCCTT CCACGGCACG CTGGACACAC CCAATCCGGC TGACGCCAAA
AACATCAAGG GCTCGGTGCT GGTCCTGCAC GGTGCTTCTG ACCCGTTGGT GCCGAAAGAG
CAACTGCCGG CTTTCGAAGA TGAAATGAAC GCCGCTGGCG TGGACTGGCA GCTATACAGC
TACGGCGGCG CATTCCATTC CTTCACCGAT CCGCACGCCA ACGTGCCGGG GATGATGATG
TACGATCCCA AAGTGTCGAG TCGCGCGTTC AAGTCCATGC ATGACCTGCT GAACGAAGTG
TTCGGCTGA
 
Protein sequence
MSSTIEIRSV VYQIDGQSYE SRLVYDTKAT AAQPGLLMAP NWMGVSQGAE DIAKAVAEKG 
YVVLLADLYG QQIRPSNNDE AGAAMTPLKN DRGLLRKRMQ AGLDQLLSQA DVSLDVSRIA
TFGFCFGGCC SLELARTGAE LKAAISFHGT LDTPNPADAK NIKGSVLVLH GASDPLVPKE
QLPAFEDEMN AAGVDWQLYS YGGAFHSFTD PHANVPGMMM YDPKVSSRAF KSMHDLLNEV
FG