Gene Psyr_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2012 
SymbolsucC 
ID3367526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2335587 
End bp2336753 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content58% 
IMG OID637652361 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_235093 
Protein GI66045252 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.807548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTC ACGAGTATCA GGGTAAGCAG CTGTTCGCTG AGTACGGCCT GCCAGTATCC 
AAGGGTTACG CGGTAGACAC CCCGGAAGCA GCAGCAGAAG CCTGCGACAA GATCGGCGGG
ACCGAGTGGG TCGTCAAAGC CCAGGTTCAC GCAGGTGGTC GCGGTAAAGC GGGCGGCGTA
AAGCTGGTTC GCAGCAAGGA AGACGCTGCA GCGTTCGCTC AACAGTGGTT GGGCAAGCGC
CTGGTGACTT ACCAGACTGA CGCCAACGGT CAGCCAGTGA CCAAGATCCT GGTCGAGTCC
TGCACCGACA TCGCCAAAGA GCTGTATCTG GGCGCTGTGG TCGATCGTTC CAGCCGTCGT
ATCGTGTTCA TGGCTTCCAC CGAAGGTGGC GTGGACATCG AGAAGATCGC TCACGACACT
CCTGAAAAGA TTCTCAAGGC CACCATCGAT CCACTGGTCG GCGCTCAGCC GTTCCAGGGT
CGCGATCTGG CATTCCAGCT GGGTCTGGAA GGCAAGCAGG TCACTCAGTT CGCCAAGATC
TTCACCGGTC TGGCCAAGCT GTTCCAGGAC CATGACCTGG CATTGCTGGA AGTGAACCCG
CTGGTGATCA AGGCTGACGG CGATCTGCAC TGCCTGGACG CCAAGATCAA CATCGACGCC
AACGCCATGT ACCGTCAGCC AAAGCTGAAG GGCTTCCACG ATCCTTCGCA GGACGATCCT
CGCGAAGCTC ACGCAGCCAA GTTCGAACTG AACTACGTTG CGCTGGAAGG CAACATCGGC
TGCATGGTCA ACGGTGCCGG TCTGGCCATG GGTACCATGG ACATCGTCAA CCTGCATGGC
GGCAAGCCTG CAAACTTCCT TGACGTTGGC GGCGGTGCCA CCAAGGAACG CGTTACCGAA
GCGTTCAAGA TCATCCTGTC CGACGCCAAC GTCGCTGCAG TACTGGTCAA CATCTTCGGC
GGCATCGTTC GTTGCGACAT GATTGCCGAA GGCATCATCG GTGCAGTGAA AGAAGTCGGC
GTTAAAATCC CGGTTGTTGT GCGCCTTGAA GGCAACAACG CTGAGCTGGG CGCTAAAGTA
CTGGCAGAAA GCGGTTTGAA CATCATCGCT GCTACCAGCC TGACCGACGC TGCTCAACAA
GTTGTCAAAG CCGCGGAGGG CAAGTAA
 
Protein sequence
MNLHEYQGKQ LFAEYGLPVS KGYAVDTPEA AAEACDKIGG TEWVVKAQVH AGGRGKAGGV 
KLVRSKEDAA AFAQQWLGKR LVTYQTDANG QPVTKILVES CTDIAKELYL GAVVDRSSRR
IVFMASTEGG VDIEKIAHDT PEKILKATID PLVGAQPFQG RDLAFQLGLE GKQVTQFAKI
FTGLAKLFQD HDLALLEVNP LVIKADGDLH CLDAKINIDA NAMYRQPKLK GFHDPSQDDP
REAHAAKFEL NYVALEGNIG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVTE
AFKIILSDAN VAAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKIPVVVRLE GNNAELGAKV
LAESGLNIIA ATSLTDAAQQ VVKAAEGK