| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2011 |
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| Symbol | |
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| ID | 3367525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2333942 |
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| End bp | 2335378 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652360 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_235092 |
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| Protein GI | 66045251 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.156976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.369181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCAGA AATTCGACGT GGTAGTGATT GGCGCAGGCC CTGGCGGTTA TGTTGCCGCC
ATCAAGGCTG CGCAACTTGG TCTCAAGACT GCCTGCATCG AGAAGTATCA GGACAAAGAG
GGCAAACTGG CCCTCGGCGG TACCTGCCTG AACGTGGGTT GCATTCCTTC CAAGGCACTG
CTCGACAGCT CCTGGAAATT CTATGAAGCC AAGAACGGTT TCAGCGTACA TGGCATCTCC
ACCTCCGACG TGAGCATCGA CGTTCCGGCG ATGATCGGCC GTAAGTCGAC CATCGTCAAA
GGCCTGACCG GCGGCGTTGC CAGCCTGTTC AAGGCCAACG GCGTGACCAC GCTGCAGGGC
CACGGCAAAC TGCTGGCCGG CAAGAAAGTC GAGCTGACCG CTGCCGACGG CACTGTCGAA
ATCATCGAAG CGGACCATGT GATCCTGGCT TCGGGTTCGC GTCCTATCGA CATTCCACCC
GCTCCGGTTG ATCAGAAAAT CATCGTCGAC TCGACCGGTG CTCTTGAATT CCAGCAGGTT
CCACAGCGTC TGGGCGTCAT CGGCGCTGGC GTGATCGGTC TGGAACTGGG TTCCGTGTGG
GCTCGCCTGG GTGCCCAGGT CACCGTTCTG GAAGCGCTGG ACAAGTTCAT CCCGGCAGCC
GACGAAGCGG TTTCCAAGGA AGCACTGAAA ACCTTCAACA AGCAGGGCCT GGACATCAAG
CTGGGCGCTC GCGTGACCGG TTCCAAGGTC GAAGGCGAAC AGGTTGTGGT CAGCTACACC
GACGCTGCCG GCGAACAGTC GATCACCTTC GATCGTCTGA TCGTTGCCGT GGGCCGTCGT
CCGGTTACCA CTGACCTGCT GGCTTCGGAC AGCGGTGTCG ATCTGGACGA GCGCGGTTTC
ATCTACGTCG ATGACTACTG CACCACCAGC GTACCGGGCG TATACGCCAT CGGTGACGTG
GTTCGCGGTC TGATGCTGGC GCACAAGGCC TCGGAAGAGG GCATCATGGT TGTCGAGCGC
ATCAAGGGCC ACAAGGCCCA GATGAACTAC AACCTGGTCC CGTCGGTTAT CTACACCCAC
CCGGAAATCG CCTGGGTAGG CAAGACCGAA CAGACCCTCA AGGCCGAAGG CGTTGAAGTC
AATGTCGGTA CGTTCCCGTT CGCAGCCAGT GGCCGTGCCA TGGCAGCCAA CGACACCGGC
GGTTTCGTCA AGATCATTGC CGACGCCAAG ACCGACCGTG TTCTGGGTGT TCACGTGATT
GGCCCGAGCG CTGCCGAACT GGTACAGCAG GGCGCAATCG CGATGGAGTT CGGTACCAGT
GCAGAGGACA TCGGCATGAT GGTCTTCTCG CACCCGACCC TGTCCGAGGC ATTGCATGAA
GCTGCACTGG CTGTGAATGG CGGCGCCATC CACATTCAGA ATCGCAAGAA ACGCTAA
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| Protein sequence | MSQKFDVVVI GAGPGGYVAA IKAAQLGLKT ACIEKYQDKE GKLALGGTCL NVGCIPSKAL
LDSSWKFYEA KNGFSVHGIS TSDVSIDVPA MIGRKSTIVK GLTGGVASLF KANGVTTLQG
HGKLLAGKKV ELTAADGTVE IIEADHVILA SGSRPIDIPP APVDQKIIVD STGALEFQQV
PQRLGVIGAG VIGLELGSVW ARLGAQVTVL EALDKFIPAA DEAVSKEALK TFNKQGLDIK
LGARVTGSKV EGEQVVVSYT DAAGEQSITF DRLIVAVGRR PVTTDLLASD SGVDLDERGF
IYVDDYCTTS VPGVYAIGDV VRGLMLAHKA SEEGIMVVER IKGHKAQMNY NLVPSVIYTH
PEIAWVGKTE QTLKAEGVEV NVGTFPFAAS GRAMAANDTG GFVKIIADAK TDRVLGVHVI
GPSAAELVQQ GAIAMEFGTS AEDIGMMVFS HPTLSEALHE AALAVNGGAI HIQNRKKR
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