Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1997 |
Symbol | |
ID | 3367511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2319018 |
End bp | 2319845 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652346 |
Product | hypothetical protein |
Protein accession | YP_235078 |
Protein GI | 66045237 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.321301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0820439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCATT CCCGGCTGCT GTCTTCGCTT CTCTTCGGGC TGATCACGCT GCCGACACTG GCATCCGCCG CAGGCAAGTG CGAGCGTCTG ATCGTGACCG GCAGCCCGGA CGCGCCGCCT TATCTGTGGC GTGATCCCCA GGACCCGCGG CACCTGATGG GCGCCAATGC CGATCTGCTG ACGCAGGCAG CGGGCGAGCT GGGTATCAAG GTCGAGTTTC TGTATGGCGG CAAGCGCAGT CAGGCACTCG AAGAAGTGCG CACCGGGCGC ATGGACCTGC TGGCTGACGC ACCGTTGAAT GCCGCACAAC TCGAAGCGCT GGATTACATT CATCCGCCGA TCGTGCAGAA CGAGATCATG GTCTGGACGC GTCACGATCA CAGCGTGCCG TTCAATGCCG TCAGCGAGCT GCAGGGCCAT CCCGGCGCCA TGTCGGAAAA GACCCGTTTG ACGCCTTCCT TTGATGCGCT GGCCAGACAG AATCTGACTC TGGAGCGCCT GCCTGCACTC ACGCCTGCCT TTCAGAAGCT GGCCTTGGGT GAGGTGGATT ACGTGCTTGC CGGGCGTTAT GCCGGTATGG TTATGGTGCA GACGCTAGGT CTTTCCACAG ACCTGACAGC GCAGCCGTTA CCGGTCGATA CACCGGGTTT TTACCTGGCC TTGTCGTTCA ACTCGGCCTG CAATGAACCA TGGTTGCGCG GACAGCTGGC GAAAAAGATG ACAGAATCGG CCGCCTCTGG CCTTGCGGGC GATGTCATCA GGCACAACCT GGCATTGTGG AAAGCCCAAC TGCTGCAGCC TGCCAGCGCC AGCGCACCCA ACAAGTAG
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Protein sequence | MVHSRLLSSL LFGLITLPTL ASAAGKCERL IVTGSPDAPP YLWRDPQDPR HLMGANADLL TQAAGELGIK VEFLYGGKRS QALEEVRTGR MDLLADAPLN AAQLEALDYI HPPIVQNEIM VWTRHDHSVP FNAVSELQGH PGAMSEKTRL TPSFDALARQ NLTLERLPAL TPAFQKLALG EVDYVLAGRY AGMVMVQTLG LSTDLTAQPL PVDTPGFYLA LSFNSACNEP WLRGQLAKKM TESAASGLAG DVIRHNLALW KAQLLQPASA SAPNK
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