Gene Psyr_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1997 
Symbol 
ID3367511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2319018 
End bp2319845 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID637652346 
Producthypothetical protein 
Protein accessionYP_235078 
Protein GI66045237 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.321301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0820439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCATT CCCGGCTGCT GTCTTCGCTT CTCTTCGGGC TGATCACGCT GCCGACACTG 
GCATCCGCCG CAGGCAAGTG CGAGCGTCTG ATCGTGACCG GCAGCCCGGA CGCGCCGCCT
TATCTGTGGC GTGATCCCCA GGACCCGCGG CACCTGATGG GCGCCAATGC CGATCTGCTG
ACGCAGGCAG CGGGCGAGCT GGGTATCAAG GTCGAGTTTC TGTATGGCGG CAAGCGCAGT
CAGGCACTCG AAGAAGTGCG CACCGGGCGC ATGGACCTGC TGGCTGACGC ACCGTTGAAT
GCCGCACAAC TCGAAGCGCT GGATTACATT CATCCGCCGA TCGTGCAGAA CGAGATCATG
GTCTGGACGC GTCACGATCA CAGCGTGCCG TTCAATGCCG TCAGCGAGCT GCAGGGCCAT
CCCGGCGCCA TGTCGGAAAA GACCCGTTTG ACGCCTTCCT TTGATGCGCT GGCCAGACAG
AATCTGACTC TGGAGCGCCT GCCTGCACTC ACGCCTGCCT TTCAGAAGCT GGCCTTGGGT
GAGGTGGATT ACGTGCTTGC CGGGCGTTAT GCCGGTATGG TTATGGTGCA GACGCTAGGT
CTTTCCACAG ACCTGACAGC GCAGCCGTTA CCGGTCGATA CACCGGGTTT TTACCTGGCC
TTGTCGTTCA ACTCGGCCTG CAATGAACCA TGGTTGCGCG GACAGCTGGC GAAAAAGATG
ACAGAATCGG CCGCCTCTGG CCTTGCGGGC GATGTCATCA GGCACAACCT GGCATTGTGG
AAAGCCCAAC TGCTGCAGCC TGCCAGCGCC AGCGCACCCA ACAAGTAG
 
Protein sequence
MVHSRLLSSL LFGLITLPTL ASAAGKCERL IVTGSPDAPP YLWRDPQDPR HLMGANADLL 
TQAAGELGIK VEFLYGGKRS QALEEVRTGR MDLLADAPLN AAQLEALDYI HPPIVQNEIM
VWTRHDHSVP FNAVSELQGH PGAMSEKTRL TPSFDALARQ NLTLERLPAL TPAFQKLALG
EVDYVLAGRY AGMVMVQTLG LSTDLTAQPL PVDTPGFYLA LSFNSACNEP WLRGQLAKKM
TESAASGLAG DVIRHNLALW KAQLLQPASA SAPNK