Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1991 |
Symbol | |
ID | 3367505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2311978 |
End bp | 2312787 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652340 |
Product | regulatory proteins, IclR |
Protein accession | YP_235072 |
Protein GI | 66045231 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0527624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0427076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAACG ATTCGATCAC TCCTGAAAAG ACTATCGGCA AGGAATCCGT ACCCACCGGG ACCCAGACCT TGCTGCGCGG GCTGGGGGTG GTGCAGGCGG TTGCCGGTGG CGCACGGGAC CTCAAGGAGA TCGCCCGGCT GATCGGCACC ACGCGCAGTA CCACGCACCG TCTGGCCAGT TGCCTGGTCG AGGAGCGTTA CCTGCGCATC GTTCCTCAGG TGGGCTATCT GCTTGGGCCG AAATTGATCG AGCTGGGGTT TCAGGCGCGT GAAGAAGTGC CCCTGGCGAT GCTGGCCCGG CCGTATCTGG ATCGCTTGTC GGAGCTGACC GGCGATACCG TGCATCTGGC GGTGCGGGAA GGGGATGACG TGCTCTATCT GCACAAGAAT CCCGGTCGCA ATGGTCCGGA AATGCGTTCG CGGGTCGGGC ATCGGATGCC GCTGGTGCGC ACCGGTATCG GCAAGGCACT GCTGCTGGAC AGTGCTCAGT CCGAGTGGCA ACGGCTGTAT GAAATCAGCA TGCCGAGCAC AGGCAGAAAT CCGCTATGGC CTGCTCATGA GCAGCAAACC TGGGAGCAGT TGAAGGCGCG GCGGGAGGAG TATGTACAAG GAGGGTATGC ATTCGATCTG GAGGACAACG AACCGTCGAT CCGTTGTGTC GCAGCGCCGG TACGTGATGC CAGCAAACAG ATCGTTGCCG GCATCAGTGT CGCCAGTACC GTGCCCTACA TGCCGCTGGA GAAGATGGCC GAGCTGGTTC CGCTGATCAA AACCATCGCG GCGGAACTCT CGGCCGATCT CGGCGGCTGA
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Protein sequence | MHNDSITPEK TIGKESVPTG TQTLLRGLGV VQAVAGGARD LKEIARLIGT TRSTTHRLAS CLVEERYLRI VPQVGYLLGP KLIELGFQAR EEVPLAMLAR PYLDRLSELT GDTVHLAVRE GDDVLYLHKN PGRNGPEMRS RVGHRMPLVR TGIGKALLLD SAQSEWQRLY EISMPSTGRN PLWPAHEQQT WEQLKARREE YVQGGYAFDL EDNEPSIRCV AAPVRDASKQ IVAGISVAST VPYMPLEKMA ELVPLIKTIA AELSADLGG
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