Gene Psyr_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1991 
Symbol 
ID3367505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2311978 
End bp2312787 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID637652340 
Productregulatory proteins, IclR 
Protein accessionYP_235072 
Protein GI66045231 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0527624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0427076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACG ATTCGATCAC TCCTGAAAAG ACTATCGGCA AGGAATCCGT ACCCACCGGG 
ACCCAGACCT TGCTGCGCGG GCTGGGGGTG GTGCAGGCGG TTGCCGGTGG CGCACGGGAC
CTCAAGGAGA TCGCCCGGCT GATCGGCACC ACGCGCAGTA CCACGCACCG TCTGGCCAGT
TGCCTGGTCG AGGAGCGTTA CCTGCGCATC GTTCCTCAGG TGGGCTATCT GCTTGGGCCG
AAATTGATCG AGCTGGGGTT TCAGGCGCGT GAAGAAGTGC CCCTGGCGAT GCTGGCCCGG
CCGTATCTGG ATCGCTTGTC GGAGCTGACC GGCGATACCG TGCATCTGGC GGTGCGGGAA
GGGGATGACG TGCTCTATCT GCACAAGAAT CCCGGTCGCA ATGGTCCGGA AATGCGTTCG
CGGGTCGGGC ATCGGATGCC GCTGGTGCGC ACCGGTATCG GCAAGGCACT GCTGCTGGAC
AGTGCTCAGT CCGAGTGGCA ACGGCTGTAT GAAATCAGCA TGCCGAGCAC AGGCAGAAAT
CCGCTATGGC CTGCTCATGA GCAGCAAACC TGGGAGCAGT TGAAGGCGCG GCGGGAGGAG
TATGTACAAG GAGGGTATGC ATTCGATCTG GAGGACAACG AACCGTCGAT CCGTTGTGTC
GCAGCGCCGG TACGTGATGC CAGCAAACAG ATCGTTGCCG GCATCAGTGT CGCCAGTACC
GTGCCCTACA TGCCGCTGGA GAAGATGGCC GAGCTGGTTC CGCTGATCAA AACCATCGCG
GCGGAACTCT CGGCCGATCT CGGCGGCTGA
 
Protein sequence
MHNDSITPEK TIGKESVPTG TQTLLRGLGV VQAVAGGARD LKEIARLIGT TRSTTHRLAS 
CLVEERYLRI VPQVGYLLGP KLIELGFQAR EEVPLAMLAR PYLDRLSELT GDTVHLAVRE
GDDVLYLHKN PGRNGPEMRS RVGHRMPLVR TGIGKALLLD SAQSEWQRLY EISMPSTGRN
PLWPAHEQQT WEQLKARREE YVQGGYAFDL EDNEPSIRCV AAPVRDASKQ IVAGISVAST
VPYMPLEKMA ELVPLIKTIA AELSADLGG