| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1990 |
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| Symbol | |
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| ID | 3367504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2310588 |
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| End bp | 2311898 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652339 |
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| Product | D-galactonate transporter |
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| Protein accession | YP_235071 |
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| Protein GI | 66045230 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0023647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0470104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTC GAACTATGGA AGGCGCGGCG TCGCTGGTGA CGCCGTCCCG CAAACGTTTC
TTTATCATGG TGCTGCTGTT CATCACCGTA GTGATCAACT ACCTGGACCG CAGCAACCTG
TCGATTGCCG CACCAGCGCT GACCTCCGAA CTGGGCCTTG ACCCGGTGCA TGTCGGGCTG
ATCTTTTCCG CGTTCGGCTG GACCTACGCC GCCATGCAGC TGCCCGGGGG CTGGCTGGTG
GACCGCGTGC CGCCGCGCAT TCTCTACACC GCAGCCCTGC TGCTGTGGTC CATCGCGACC
ATCATGCTCG GCTTCGCCGC CAGCTTCATC GCCCTGTTCG TACTGCGCAT GGCGGTCGGT
GCGCTGGAAG CACCTGCTTA TCCGATCAAC AGCCGCGTGG TCACCACCTG GTTTCCCGAG
CGCGAGCGGG CCACTGCCAT CGGCGTCTAT ACCTCCGGAC AGTTCGTCGG TCTGGCGTTT
CTGACCCCGG TGCTGGCCTG GCTGCAGGCG CACTACGGCT GGCACATGGT GTTTGTCGCT
ACCGGTGGAG TCGGCGTGTT GTGGGCGTTG ATCTGGTACA CGGTGTATCG CGAGCCACGT
GATTTCAACG GCGTCAATCA GCAGGAAATC GAACTGATCC AGGAGGGCGG CGGGCTGGTG
GACATCCAGA AGGACGTCGA AAAACAGAAG CAGGCGTTCA GCTGGCTGGA CCTGGGTATT
GTGTTGAGCA AGCGCAAGCT GTGGGGCATC TACCTGGGGC AATTCTGCCT GAACTCCACG
CTGTGGTTTT TCCTGACCTG GTTCCCGACC TACCTGGTGA AATACCGGGG CATGGACTTC
ATCAAATCGG GCCTGCTGGC GTCGTTGCCG TTCCTCGCCG CGTTTGTCGG TGTGCTGTGC
TCGGGCTTCT TCTCCGACTG GCTGATCCGC CGCGGGCATA GCGTAGGCTT TGCACGCAAG
TTGCCGATCA TTGCCGGGCT GCTGATCTCG ACCTCGATCA TCGGTGCCAA CTTCGTCGAC
TCCACGCCGC TGGTGATCAC CTTTCTGGCG CTGGCGTTCT TCGGCAACGG TCTGGCGTCG
ATCACCTGGT CGCTGGTCTC GACCCTGGCG CCAGCGCGCC TGCTGGGCCT GACCGGTGGC
ACGTTCAACT TCATCGGCAA CCTCTCTGCC ATCGCCACCC CGATCGTGAT CGGCTTTCTG
GCGTCGGGAG ACTCGTTTGC GCCTGCCATT ACCTACATAT CGGTCCTGGC ACTGCTGGGC
GCGCTGTCTT ACATCCTGCT GGTAGGGAAG GTGGAGCGTA TCGAGCTCTG A
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| Protein sequence | MRTRTMEGAA SLVTPSRKRF FIMVLLFITV VINYLDRSNL SIAAPALTSE LGLDPVHVGL
IFSAFGWTYA AMQLPGGWLV DRVPPRILYT AALLLWSIAT IMLGFAASFI ALFVLRMAVG
ALEAPAYPIN SRVVTTWFPE RERATAIGVY TSGQFVGLAF LTPVLAWLQA HYGWHMVFVA
TGGVGVLWAL IWYTVYREPR DFNGVNQQEI ELIQEGGGLV DIQKDVEKQK QAFSWLDLGI
VLSKRKLWGI YLGQFCLNST LWFFLTWFPT YLVKYRGMDF IKSGLLASLP FLAAFVGVLC
SGFFSDWLIR RGHSVGFARK LPIIAGLLIS TSIIGANFVD STPLVITFLA LAFFGNGLAS
ITWSLVSTLA PARLLGLTGG TFNFIGNLSA IATPIVIGFL ASGDSFAPAI TYISVLALLG
ALSYILLVGK VERIEL
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