Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1988 |
Symbol | |
ID | 3367502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2308408 |
End bp | 2309043 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652337 |
Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
Protein accession | YP_235069 |
Protein GI | 66045228 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0198953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGC AAGCATTGAA AGAAAATGGT CTGGTCGCGA TTCTGCGCGG CTTGCGTCCC GAAGAAGCGC CTGCCATGGG CGATGCGCTG TACGAAGCGG GTTTTCGGGT CATCGAAGTG CCGCTCAACT CTCCGCAACC GTTCGACAGC ATCCGCCTGT TGCGACAGCA GTTGCCTGCC GATTGCCTGA TCGGTGCTGG CACTGTGCTC ACCCCTGAGC AGGTGACTCA GGTCAAGGAC GCCGGCGGGC AAGTGATCGT CATGCCGCAC AGCGACGCCA AGGTGCTGCG TGCGGCCAAG GCGGCCGGGC TATTCCTGTC GCCAGGCGTC GCGACGCCGA CCGAAGCCTT TGCGGCACTG GCCGAAGGCG CCGATGTGCT CAAGCTGTTT CCTGCCGAGC AGATGTCGCC GGCGGTGGTC AAGGCGTGGC TGGCGGTCTT GCCCAAGGGC ACGATTCTGC TGCCGGTCGG TGGTATCTCG CCGGACAACA TGAAGGTATT TCTCGACGCC GGTGTGAAGG GGTTTGGTCT GGGCTCCGGG CTGTTCAAAC CTGGCATGAG CGTCGCAGAC GTCACCGAGC GTGCCCAGGC CTATGTGGCG GCCTGGAAGC AGCACAGCGC AGCGCTTGCA GACTGA
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Protein sequence | MLKQALKENG LVAILRGLRP EEAPAMGDAL YEAGFRVIEV PLNSPQPFDS IRLLRQQLPA DCLIGAGTVL TPEQVTQVKD AGGQVIVMPH SDAKVLRAAK AAGLFLSPGV ATPTEAFAAL AEGADVLKLF PAEQMSPAVV KAWLAVLPKG TILLPVGGIS PDNMKVFLDA GVKGFGLGSG LFKPGMSVAD VTERAQAYVA AWKQHSAALA D
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