Gene Psyr_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1986 
Symbol 
ID3367500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2306109 
End bp2307221 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content62% 
IMG OID637652335 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_235067 
Protein GI66045226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.253186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0177788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTG TAGGTCTGAT CGGTTGGCGT GGCATGGTCG GTTCCGTGCT CATGCAGCGG 
ATGCGGGAAG AGCAGGACTT CGATCTCATT GAGCCGGTGT TCTTCACTAC TTCCAATGTC
GGTGGCCAGG CGCCTTCGGT GGGCAAGGAT GTTGCGCCCC TGAAAGATGC CTACAGCATC
GACGAGCTGA AAACCCTGGA CGTGGTGCTG ACCTGCCAGG GTGGCGACTA CACCAATGAG
GTGTTCCCCA AGCTGCGCGA AGCGGGCTGG CAGGGTTACT GGATCGATGC GGCGTCCAGC
CTGCGCATGC AGGATGATGC GGTCATCGTG CTTGACCCGG TGAACCGCAA GGTCATCGAC
CAGCAACTGG ACGCGGGCAC CAAGAACTAT ATCGGTGGCA ACTGCACCGT CAGCCTGATG
CTGATGGGGC TGGGCGGCCT GTTCGATGCC GGTCTGGTCG AGTGGATGAA CGTCATGACC
TATCAGGCGG CCTCCGGCGC CGGCGCGCAG AACATGCGTG AGCTGATCAG GCAGATGGGC
GCGGTGCATG CTTCGGTGGC CGATGATCTG GCCAACCCGG CCAGCGCCAT TCTGGACATC
GACCGCAAGG TGGCTGAAGC CATGCGCAGC GAGTCGTTCC CTACCGAGAA CTTCGGCGTA
CCGCTTGCGG GCAGCCTGAT CCCGTGGATC GACAAGGCCC TGCCAAACGG CCAGAGCCGC
GAAGAGTGGA AAGGCCAGGC CGAGACCAAC AAGATCCTCG GTCGCTTCAA GAGCCCGATC
CCGGTGGACG GCATCTGCGT GCGCATCGGC GCCATGCGTT GCCATAGCCA GGCGCTGACC
ATCAAGCTGA ACAAGGATGT GCCGATTGCG GACATCGAAG GTTTGATCAG CCAGCACAAC
CCGTGGGTCA AGCTGGTGCC GAACAACCGC GAAGCCAGCA TGCACGAGCT GAGCCCGACC
GCCGTGACCG GCACCATGAG CATTCCGGTA GGGCGTCTGC GCAAACTCAA CATGGGTTCG
CAGTACCTGG GCGCTTTCAC CGTGGGTGAC CAGCTGTTGT GGGGCGCTGC GGAGCCGCTG
CGTCGCATGC TGAGAATCCT GCTGGAGCGT TGA
 
Protein sequence
MKRVGLIGWR GMVGSVLMQR MREEQDFDLI EPVFFTTSNV GGQAPSVGKD VAPLKDAYSI 
DELKTLDVVL TCQGGDYTNE VFPKLREAGW QGYWIDAASS LRMQDDAVIV LDPVNRKVID
QQLDAGTKNY IGGNCTVSLM LMGLGGLFDA GLVEWMNVMT YQAASGAGAQ NMRELIRQMG
AVHASVADDL ANPASAILDI DRKVAEAMRS ESFPTENFGV PLAGSLIPWI DKALPNGQSR
EEWKGQAETN KILGRFKSPI PVDGICVRIG AMRCHSQALT IKLNKDVPIA DIEGLISQHN
PWVKLVPNNR EASMHELSPT AVTGTMSIPV GRLRKLNMGS QYLGAFTVGD QLLWGAAEPL
RRMLRILLER