Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1986 |
Symbol | |
ID | 3367500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2306109 |
End bp | 2307221 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652335 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_235067 |
Protein GI | 66045226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.253186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0177788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTG TAGGTCTGAT CGGTTGGCGT GGCATGGTCG GTTCCGTGCT CATGCAGCGG ATGCGGGAAG AGCAGGACTT CGATCTCATT GAGCCGGTGT TCTTCACTAC TTCCAATGTC GGTGGCCAGG CGCCTTCGGT GGGCAAGGAT GTTGCGCCCC TGAAAGATGC CTACAGCATC GACGAGCTGA AAACCCTGGA CGTGGTGCTG ACCTGCCAGG GTGGCGACTA CACCAATGAG GTGTTCCCCA AGCTGCGCGA AGCGGGCTGG CAGGGTTACT GGATCGATGC GGCGTCCAGC CTGCGCATGC AGGATGATGC GGTCATCGTG CTTGACCCGG TGAACCGCAA GGTCATCGAC CAGCAACTGG ACGCGGGCAC CAAGAACTAT ATCGGTGGCA ACTGCACCGT CAGCCTGATG CTGATGGGGC TGGGCGGCCT GTTCGATGCC GGTCTGGTCG AGTGGATGAA CGTCATGACC TATCAGGCGG CCTCCGGCGC CGGCGCGCAG AACATGCGTG AGCTGATCAG GCAGATGGGC GCGGTGCATG CTTCGGTGGC CGATGATCTG GCCAACCCGG CCAGCGCCAT TCTGGACATC GACCGCAAGG TGGCTGAAGC CATGCGCAGC GAGTCGTTCC CTACCGAGAA CTTCGGCGTA CCGCTTGCGG GCAGCCTGAT CCCGTGGATC GACAAGGCCC TGCCAAACGG CCAGAGCCGC GAAGAGTGGA AAGGCCAGGC CGAGACCAAC AAGATCCTCG GTCGCTTCAA GAGCCCGATC CCGGTGGACG GCATCTGCGT GCGCATCGGC GCCATGCGTT GCCATAGCCA GGCGCTGACC ATCAAGCTGA ACAAGGATGT GCCGATTGCG GACATCGAAG GTTTGATCAG CCAGCACAAC CCGTGGGTCA AGCTGGTGCC GAACAACCGC GAAGCCAGCA TGCACGAGCT GAGCCCGACC GCCGTGACCG GCACCATGAG CATTCCGGTA GGGCGTCTGC GCAAACTCAA CATGGGTTCG CAGTACCTGG GCGCTTTCAC CGTGGGTGAC CAGCTGTTGT GGGGCGCTGC GGAGCCGCTG CGTCGCATGC TGAGAATCCT GCTGGAGCGT TGA
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Protein sequence | MKRVGLIGWR GMVGSVLMQR MREEQDFDLI EPVFFTTSNV GGQAPSVGKD VAPLKDAYSI DELKTLDVVL TCQGGDYTNE VFPKLREAGW QGYWIDAASS LRMQDDAVIV LDPVNRKVID QQLDAGTKNY IGGNCTVSLM LMGLGGLFDA GLVEWMNVMT YQAASGAGAQ NMRELIRQMG AVHASVADDL ANPASAILDI DRKVAEAMRS ESFPTENFGV PLAGSLIPWI DKALPNGQSR EEWKGQAETN KILGRFKSPI PVDGICVRIG AMRCHSQALT IKLNKDVPIA DIEGLISQHN PWVKLVPNNR EASMHELSPT AVTGTMSIPV GRLRKLNMGS QYLGAFTVGD QLLWGAAEPL RRMLRILLER
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