Gene Psyr_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1980 
Symbol 
ID3367494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2298939 
End bp2299382 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content55% 
IMG OID637652329 
Productheat shock protein Hsp20 
Protein accessionYP_235061 
Protein GI66045220 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.168332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0400891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG CATTTTCTCT GGCTCCACTG TTTCGCAACT CAGTGGGATT CGACCGCTTC 
AACGACCTCT TCGAGTCGGC GGCGCGAAAT GAGACAACCA GCGGCTATCC GCCCTACAAC
GTCGAGCGGC ACACCGATGA CCATTATCGA ATCGTGATCG CTGCAGCAGG CATGCAAGAG
CAGGATCTCG AGTTGCAGGT TGAAAAGGGT GTGCTGACCG TGATCGGCAA CAAGCGCGAG
CAAGAAGCCG AAAACGTGAC GTATCTGCAT CAGGGTATTG CCCGGCGTGA ATTCAAGCTG
TCGTTCAGGC TGGCGGACAA TATCGAGGTC AAAGGGGCCG ATCTGTCTCA CGGCCTGCTG
AACATTGACC TGGTGCGCAA CGTGCCGGAA GAAGCGAAAC CGAAACGCAT TCCGCTCAAT
AGCCAGAAAG CGCTGGAAAA CTGA
 
Protein sequence
MATAFSLAPL FRNSVGFDRF NDLFESAARN ETTSGYPPYN VERHTDDHYR IVIAAAGMQE 
QDLELQVEKG VLTVIGNKRE QEAENVTYLH QGIARREFKL SFRLADNIEV KGADLSHGLL
NIDLVRNVPE EAKPKRIPLN SQKALEN