Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1979 |
Symbol | |
ID | 3367493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2297844 |
End bp | 2298809 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652328 |
Product | dihydrouridine synthase, DuS |
Protein accession | YP_235060 |
Protein GI | 66045219 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.160423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTG CTCTGGCGCC CATGGAGGGG TTGGTCGACG ACATCCTGCG TAATGTGCTG ACGAAAGTCG GCGGCATCGA CTGGTGCGTG ACCGAATTCA TCCGGGTGTC CGAGCGTTTG ATGCCGGCGC ACTACTTCTA CAAGTACGCT TCGGAGTTTC ATAACGGCGC GAAGACTGAC GCCGGTACGC CTTTACGGCT CCAGCTGTTG GGCTCCGATC CGGTGTGTCT GGCCGAGAAT GCCGCGTTCG CCTGCGAGCT GGGCGCGCCG GTGCTGGACC TGAACTTCGG TTGCCCGGCC AAGACCGTCA ACCGTTCCCG TGGTGGCGCA GTTCTGCTCA AGGAGCCGGA ACTGCTGCAC ACCATTGTCA GCCAGGTGCG CCGTGCTGTG CCCAAAGACA TACCGGTCAC CGCCAAGATG CGTTTGGGCT ACGAAAACAC CGACCTGGCG CTGGATTGCG CCAGAGCGTT GGCTGACGGC GGGGCCGAGC AAATCGTCGT GCATGCGCGC ACCAAGGTCG ACGGCTACAA GCCGCCGGCG CACTGGGAGT GGATCGCGCG CATCCAGGAA GTGGTCAAGG TCCCGGTAGT TGCCAACGGG GAAATCTGGA CCGTTGAGGA TTGGCGGCGA TGCCGCGAAA TCTGCGGCGC GCGGGACATC ATGATCGGTC GCGGGCTGGT GGCGCGCCCT GATCTCGCCC GGCAGATTGC TGCGGCGCAG AAGGGCGAAG AGGTGGTGCC GATGACTTGG GACGCGTTGC AGCCGATGCT GCGGGTCTTC TGGCAGGACT GTCTGGTGAA GATGACGCTG ATTCAGGCAC CGGGTCGGCT CAAGCAGTGG CTGGTGCTGC TGACCAAAAG CTACCCCGAG GCGACCCTGA TGTTCAATAC GTTGCGCCGC GAGACCGACT GCGATCGCAT CAGCGTATTG CTGGGCTGCG CGCCCGGTTG CTTACCCAAA AGCTGA
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Protein sequence | MQIALAPMEG LVDDILRNVL TKVGGIDWCV TEFIRVSERL MPAHYFYKYA SEFHNGAKTD AGTPLRLQLL GSDPVCLAEN AAFACELGAP VLDLNFGCPA KTVNRSRGGA VLLKEPELLH TIVSQVRRAV PKDIPVTAKM RLGYENTDLA LDCARALADG GAEQIVVHAR TKVDGYKPPA HWEWIARIQE VVKVPVVANG EIWTVEDWRR CREICGARDI MIGRGLVARP DLARQIAAAQ KGEEVVPMTW DALQPMLRVF WQDCLVKMTL IQAPGRLKQW LVLLTKSYPE ATLMFNTLRR ETDCDRISVL LGCAPGCLPK S
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