Gene Psyr_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1977 
SymbolgltX 
ID3367487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2294713 
End bp2296194 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content61% 
IMG OID637652322 
Productglutamyl-tRNA synthetase 
Protein accessionYP_235058 
Protein GI66045217 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.311183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG TTCGTACCCG CATCGCGCCA TCGCCCACAG GCGACCCCCA CGTCGGCACG 
GCCTACATCG CGCTGTTCAA CTACTGCTTT GCCAAACAGC ACGGCGGCGA GTTCATCCTG
CGCATTGAAG ACACCGATCA ACTGCGCTCT ACCCGCGAGT CCGAACAGCA GATCTTCGAC
GCACTGCGCT GGCTGGGCAT CGACTGGAGC GAAGGCCCCG ACGTCGGTGG TCCTCACGGT
CCCTACCGCC AGAGCGAGCG CGGCGACATC TACCAGAAAT ACGCGCAGCA ACTGGTCGAC
ATGGGCCATG CCTTCCCGTG CTTCTGCACC GCCGAAGAAC TCGACCAGAT GCGCGCCGAA
CAGCAGGCCA AGGGCGAAAC CCCGCGCTAT GACGGTCGTG CCTTGCTGCT CTCCAAGGAA
GAGGTTCAGC GCCGCCTGGA TGCCGGCGAG CCACACGTGA TCCGCATGAA AGTGCCGACC
GAAGGTGTCT GCGTAGTACC TGACATGCTG CGTGGCGAAG TCGAAATCCC GTGGGACCGC
ATGGACATGC AGGTCCTGAT GAAGACCGAC GGCCTGCCGA CCTACTTCCT CGCCAACGTG
GTCGATGACC ACCTGATGGG CATCACCCAT GTACTGCGCG GCGAAGAATG GCTGCCTTCG
GCGCCGAAAC TGATCCTGCT GTACGAATAC TTCGGCTGGG ACAAGCCGCA GCTGTGCTAC
ATGCCGCTGC TGCGTAACCC CGACAAGAGC AAGCTGTCCA AGCGCAAGAA CCCCACCTCG
GTGACCTTCT ACGAGCGCAT GGGCTTCATG CCCGAGGCGA TGCTCAACTA CCTGGGGCGC
ATGGGCTGGT CGATGCCTGA CGAGCGCGAG AAGTTCTCCC TGCAGGAGAT GGTCGACAAC
TTCGACCTGT CGCGTGTTTC GTTGGGCGGG CCGATCTTCG ATATCGAGAA GCTTTCCTGG
CTCAATGGCC AATGGCTGCG TGATCTGCCG GTCGAGGAGT TCGCCTCGCG TCTGAAGACC
TGGGCGCTGA ATCCTGACTA CATGATGAAG ATTGCACCGC ATGTGCAGGG CAGGGTAGAG
ACCTTCAGTC AGGTCGCACC GCTGGCCGGC TTCTTCTTCG CAGGTGGCGT CACGCCTGAT
GTGAAGCTGT TCGAGCACAA GAAGCTGTCC CCGGAGCAGG TGCGTCAGGT GATGCAACTG
ATCCTGTGGA AGCTGGAATC GCTGCGTCAG TGGGAGAAGG AGCGGATCAT GGGCTGCATC
CAGGCCGTGG TCGAGCATCT TGAACTCAAG CTGCGTGATG CCATGCCACT GATGTTCGCT
GCGATCACCG GCCAGGCCAA TTCGGTGTCG GTGACCGATG CGATGGAAAT CCTCGGTCCG
GACCTGACCC GCTTCCGGCT GCGTCAGGCC CTCGATTTGC TCGGTGGCGT TTCCAAGAAA
GAAAACAAGG AATGGGAAAA GCTTCTGGGC TCTATCGCCT GA
 
Protein sequence
MTTVRTRIAP SPTGDPHVGT AYIALFNYCF AKQHGGEFIL RIEDTDQLRS TRESEQQIFD 
ALRWLGIDWS EGPDVGGPHG PYRQSERGDI YQKYAQQLVD MGHAFPCFCT AEELDQMRAE
QQAKGETPRY DGRALLLSKE EVQRRLDAGE PHVIRMKVPT EGVCVVPDML RGEVEIPWDR
MDMQVLMKTD GLPTYFLANV VDDHLMGITH VLRGEEWLPS APKLILLYEY FGWDKPQLCY
MPLLRNPDKS KLSKRKNPTS VTFYERMGFM PEAMLNYLGR MGWSMPDERE KFSLQEMVDN
FDLSRVSLGG PIFDIEKLSW LNGQWLRDLP VEEFASRLKT WALNPDYMMK IAPHVQGRVE
TFSQVAPLAG FFFAGGVTPD VKLFEHKKLS PEQVRQVMQL ILWKLESLRQ WEKERIMGCI
QAVVEHLELK LRDAMPLMFA AITGQANSVS VTDAMEILGP DLTRFRLRQA LDLLGGVSKK
ENKEWEKLLG SIA