| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1969 |
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| Symbol | |
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| ID | 3367479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2282501 |
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| End bp | 2284474 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637652314 |
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| Product | ABC transporter |
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| Protein accession | YP_235050 |
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| Protein GI | 66045209 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.598112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.988518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACGC CGCTGATCGA CCTGCGAGGC ATTCGCAAAT CCTACGGCGG AGGCGACAGC
CCGCTGGTCA ACGTGCTGCG CGGCATCGAT CTGTCGATTC ATACCGGTGA GTTCGTGGCG
ATTGTCGGCG CTTCCGGGTC CGGCAAGTCG ACGCTGATGA ACATCCTCGG TTGTCTGGAC
CGTCCAACCT CGGGCGAATA CCTGTTCGCC GGAGAAAACG TCGCCGCGCT GGGCAGCGAC
GAACTCGCCT GGCTGCGCCG CGAGGCATTC GGGTTCGTGT TTCAGGGCTA TCACCTGATT
CCGTCCGGCT CGGCCCAGGA AAACGTCGAG ATGCCGGCGA TCTACGCCGG GACGCCCGCC
GCAGAGCGTC ATGCCCGAGC CGCCGCCCTG CTCGACCGGC TGGGCCTGGC GTCGCGCACC
GGCAATCGGC CGCACCAGTT GTCCGGCGGC CAGCAGCAAC GGGTGTCCAT CGCCCGCGCC
TTGATGAATG GCGGGCACAT CATCCTCGCC GACGAGCCCA CCGGTGCGCT GGACAGCCAC
AGTGGCGCGG AGGTCATGAC TCTGCTCGAC GAACTGGCGA GCCAGGGCCA TGTGGTGATC
CTCATCACCC ATGATCGCGA AGTGGCGGCG CGCGCCAAAC GGGTCATCGA GATCAGCGAT
GGGCTGGTGA TCAGTGATAC GGCTCAAGAT GCTTCTGACG TGCAGCGCTC AGTCAATCCA
GCCGCGCTGC AGGCGGTCGA CCTGCGCAAG CGTCTGAGCG AAGGCAGCGG CAGCCAAAGC
GCCTGGCAAG GCGAACTGTT CGACGCGATT CGGGCGGCGT GGCGAGTGAT GTGGATCAAC
CGCTTCCGAA CCGCGCTGAC CTTGCTGGGC ATCGTCATCG GCGTGGCGTC GGTGGTGGTG
ATGCTGGCTG TCGGCGAAGG CAGCAAACGT CAGGTGATGG CGCAGATGTC CTCGTTCGGT
TCCAACATCA TTTACCTCAA CGGCAAGGCG CCCAACCCGC GTGCGCCCAA GGGCGTCATC
ACCCTGGAGG AAGTCGCTGC GCTGGGCGAG TTGCCCGAGG TGAAAATGAT CATGCCGGTC
AACGGCGGCC AGGCCGGGGT GCGCTACGGC AACCTCGATC ATTCCAGTTA CGTCGGCGGT
AATGACACGC ACTTTCCGGC GATCTTCAAC TGGCCGGTGG TGGAAGGCAG TTATTTCAGC
GAGGCTGATG AGCAGAACGC AGCCGCCGTG GCAGTGATTG GTTACAAGGT TCGCCAAAAA
CTGTTCGGCG AGCAGAGCGA CCCTGTCGGC CAGTACATCC TGATCGAAAA CGTGCCTTTT
CAGGTGGTCG GCGTGCTGCA GGAAAAAGGC GCCACATCGG GCGATCTGGA CAGCGACAAT
CGCATCGCCA TCCCCTACTC GTCGGCCAGC ATCCGCCTGT TCGGCACACA GGACCCCGAG
TACATCACCA TCGCCACCCG CGACGCCAAC AACGTCAAAC AGGCTGAACA GTCGATACGC
AACCTGCTGC AACAGCTGCA TCACGGCAAA CAGGATTACG AGCTGACCAA CAACGCCGCG
ATGATCCAGG CCGAAGCCCG CACCCAGAAC ACCCTGTCGC TGATGCTCGG CTCGATTGCC
GCCATTTCCT TGCTGGTCGG CGGTATCGGA GTGATGAACA TCATGCTGAT GACGGTGCGC
GAACGCACCC GTGAAATCGG CATCCGCATG GCCACCGGCG CGCGGCAGAG CGACATCCTG
CGGCAGTTTC TCACCGAGGC GGTGATGCTT TCCGTGGTCG GCGGGCTGGC CGGTATCGTG
CTGGCGCTGG GCATGGGCGC AGCGCTGCTG CTGAGTAAGG TGGCCGTGGC GTTCACCCTG
CCGGCTGTGG CCGGGGCGTT TGCCTGCGCC CTGATCACCG GCGTGATCTT CGGTTTCATG
CCGGCCCGCA AGGCTGCCCG CCTCGACCCG GTCGCGGCCC TCACCAGTGA ATGA
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| Protein sequence | MRTPLIDLRG IRKSYGGGDS PLVNVLRGID LSIHTGEFVA IVGASGSGKS TLMNILGCLD
RPTSGEYLFA GENVAALGSD ELAWLRREAF GFVFQGYHLI PSGSAQENVE MPAIYAGTPA
AERHARAAAL LDRLGLASRT GNRPHQLSGG QQQRVSIARA LMNGGHIILA DEPTGALDSH
SGAEVMTLLD ELASQGHVVI LITHDREVAA RAKRVIEISD GLVISDTAQD ASDVQRSVNP
AALQAVDLRK RLSEGSGSQS AWQGELFDAI RAAWRVMWIN RFRTALTLLG IVIGVASVVV
MLAVGEGSKR QVMAQMSSFG SNIIYLNGKA PNPRAPKGVI TLEEVAALGE LPEVKMIMPV
NGGQAGVRYG NLDHSSYVGG NDTHFPAIFN WPVVEGSYFS EADEQNAAAV AVIGYKVRQK
LFGEQSDPVG QYILIENVPF QVVGVLQEKG ATSGDLDSDN RIAIPYSSAS IRLFGTQDPE
YITIATRDAN NVKQAEQSIR NLLQQLHHGK QDYELTNNAA MIQAEARTQN TLSLMLGSIA
AISLLVGGIG VMNIMLMTVR ERTREIGIRM ATGARQSDIL RQFLTEAVML SVVGGLAGIV
LALGMGAALL LSKVAVAFTL PAVAGAFACA LITGVIFGFM PARKAARLDP VAALTSE
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