| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1965 |
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| Symbol | |
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| ID | 3367475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2276273 |
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| End bp | 2277553 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637652310 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_235046 |
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| Protein GI | 66045205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0412227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.496395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC GCAGAACCTT CCTCAAACAG GCCGGGCTGC TCGCGGCAGC CCTGCCCCTG
GGCTCCGGCC TTGCAACGGC AGCCGTGACG CCAGCGACTC AGCCGGCCTC CACGGACAAA
TGGACGCGCC TGAAACAATT GTTCAATCAG GACCCGGATT ACGTCCACCT CTCCAATTTT
CTGGTCACCT CGCACCCTGC ACCGGTTCGC CAGGCCATCG AACAGCATCG TGCGCATATC
GACCGTAATC CCGGTCTGGC CATGGACTGG GACCTGGGAG AGACCGAGCG CCGCGAACAC
GAGGTTCGCG TCTGGGCGGG CAAGTACCTG AACGCCCAAC CCGGCCAGAT CGCCCTGACC
GGCAGCACCA CTGAAGGCCT GGCAATCATC TACGGCGGTC TCCATGTGCG CCCGGATCAG
GAGATTCTGA CCACCGAACA CGAGCACTCC TGCGTCCACG ATATCCTCAA ATTCCGTCAG
CAGCGCGACG GCACGCAGGT GCGCAAGATT CGCCTGTTCA AGGACCCGGC GACCGTCTCG
GCCGATGAAA TCATCGGCTC CATCGCGCGC AGCATTCAGC CGAAGACGCG GGTGCTGGGC
ATGACCTGGG TGCAGTCCGG CAGCGGCGTG AAACTGCCCA TCGCGGCCAT CGGCGATCTG
GTCGAGGAAC ACAATCGCAA CCGTGACGAC CAGGAGCGCA TTCTCTACGT GGTCGACGGC
GTGCATGGCT TTGGCGTCGA GAACCTCGAT TTCCCGGAGA TGAAGTGCGA CTTCTATGTC
GCCGGCACCC ACAAGTGGCT GTTTGGCCCG CGCGGCACCG GCATCGTTTG CGCACGCTCG
GAACAGGTCA AGGACCTCAC GCCGCTGATC CCGACGTTCT CGGAAGCCAC CGGTTTCAGC
ACGATCATAA CGCCCGGTGG CTACCACTCG TTCGAACACC GCTGGGCGTT GAACGAGGCC
TTCAAACTGC ACCTGCAACT GGGCAAGGCC GATGTGCAGG CACGCATTCA CCAGCTCAAC
AGTTACCTCA AGCAGCGCCT CAAGGCTCAG CCCAATGTCG AGCTGGTGAC GCCGATGGAC
CCTGCGCTGT CGGCGGGCTT CAGCTTCTTC CGGCTCAAGG GCCAGTCGTG CGACGACGTG
GCGGCCTGGC TGATGGAGCA GCGCATGGTC GTTGACGCGG TGAGTCGCGA CGTCGGCCCG
GTGGTGCGCA CCGCGCCAGG GCTGCTGAAC AGCGAAGCCG AAATCGATCG TTTCATGACG
CTGCTCGCCC GGCGCGCCTG A
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| Protein sequence | MTDRRTFLKQ AGLLAAALPL GSGLATAAVT PATQPASTDK WTRLKQLFNQ DPDYVHLSNF
LVTSHPAPVR QAIEQHRAHI DRNPGLAMDW DLGETERREH EVRVWAGKYL NAQPGQIALT
GSTTEGLAII YGGLHVRPDQ EILTTEHEHS CVHDILKFRQ QRDGTQVRKI RLFKDPATVS
ADEIIGSIAR SIQPKTRVLG MTWVQSGSGV KLPIAAIGDL VEEHNRNRDD QERILYVVDG
VHGFGVENLD FPEMKCDFYV AGTHKWLFGP RGTGIVCARS EQVKDLTPLI PTFSEATGFS
TIITPGGYHS FEHRWALNEA FKLHLQLGKA DVQARIHQLN SYLKQRLKAQ PNVELVTPMD
PALSAGFSFF RLKGQSCDDV AAWLMEQRMV VDAVSRDVGP VVRTAPGLLN SEAEIDRFMT
LLARRA
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