Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1964 |
Symbol | |
ID | 3367474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2275359 |
End bp | 2276225 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652309 |
Product | hypothetical protein |
Protein accession | YP_235045 |
Protein GI | 66045204 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00574868 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.693869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CATTGCTGCC CCTGTCCGCC CTGCTCGGCC TGTTGCTATG CGGCACCACC CTCGCCGCCA CGCCCGCAGC GGTGCCCGCG CCCGGAAAAG TGTTCAAGGA CTGCAAGGAC TGCCCGGAAA TGGTCGTGCT GCCTGCGGGC ACTTTCACCA TGGGTGCGCC CGAAGAGGAA CTGGGTCGTC AGCCGGACGA AGGCCCGCTG CATGACGTGA CCTTCGCCAA ACCGTTCGCC ATCAGCCGCT TTCAGGTACT GGCTGGCGAA TGGGCCGCCT ATATCAAAAG CTCCGGTTAC AAAATGCCGG ATGGCGATAC CCGGCCGGGC CGCGAGTGCA AGGCCGGCAA GCCGCGCTAC CCGCTGAGCC CGCGTCAGCC TGCGGTGTGC ATGGACTGGA ACGAAGCCAA GGCGTATGTC GAATGGCTGT CGAAAAAAAC CGGCAAGTCC TACCACATGG TCAGCGAAGC CCAGCGTGAA TACGCGGCAC GCGGCGGCAG CAAGGGCTCG TTCCCGTTTC CGATGGACGA AGGCAAGCCC TACAGCATTG CCAAACACGC CAACACCTAC GGCCCGGAAG ACGGTTTCAG CTACACAGCG CCTGCCGGCA GCTACAGCCC CAACGATTTC GGCATCTACG ACGCCCACGG CAACGTCTAC GAGTGGACCG CCGATTGCGA GACCAGCAAC TACAACGGCG CGCCCACCGA TGGCAGCGCG TGGCTGGCCG GTGATTGCAC CTGGAAGATG ATTCGCGGCA ATGACTGGAC CGAAGCGCCG ATCTTCTCGC GCTCTGGCAA CCGCAACAGC CGCCAGCCGG ATGTACGGGG TGACTGGCTG GGTTTCCGGG TCGCCCGCGA CCTCTGA
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Protein sequence | MKKTLLPLSA LLGLLLCGTT LAATPAAVPA PGKVFKDCKD CPEMVVLPAG TFTMGAPEEE LGRQPDEGPL HDVTFAKPFA ISRFQVLAGE WAAYIKSSGY KMPDGDTRPG RECKAGKPRY PLSPRQPAVC MDWNEAKAYV EWLSKKTGKS YHMVSEAQRE YAARGGSKGS FPFPMDEGKP YSIAKHANTY GPEDGFSYTA PAGSYSPNDF GIYDAHGNVY EWTADCETSN YNGAPTDGSA WLAGDCTWKM IRGNDWTEAP IFSRSGNRNS RQPDVRGDWL GFRVARDL
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