| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1963 |
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| Symbol | |
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| ID | 3367473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2273616 |
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| End bp | 2275292 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637652308 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_235044 |
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| Protein GI | 66045203 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.787784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.816592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CAACTGAAAG CCTCGCCCGG GAAACCCTGA GAATCCTCAA GCCGTTCTGG
TGGCTGGTGG CGCTGTCGAC CTTGCTGGGG ATTGTCAGCG GCCTGAGCGT CACCGGCCTG
CTGGCCACCA TCAACAACGC GATGAACAGG CCAGGCGGGC CGGACACGCA GACCGCGCTG
CTGTTCGCCG GCCTGTGTGT GCTGACCCTG GCGTGTTCGA CCCTGTCCAA CCTGTCGACC
AATTACGTCG GCCAGCGAGT CGTCGCCAAC CTGCGCCGCG AGCTGGCGGC CAAGGTGCTG
GTCGCGCCCA TCGAGCAGCT GGAACGCTAT CGCGCGCACC GCCTGATCCC GGTGCTGCTC
AACGACGTCA ACACCATCAG CACCTTTGCC CTGTCGGTCG CGCCGATGGT GATCTCGTTT
ACCGTCACCC TCGGCTGTCT GGCCTATCTG GCCGTGCTGT CCTGGCAGAT TCTGGCACTG
ACAGTGCTCA CCGTGGTGCT CGGCACCGGC GCACAATACC TGGCGCATGC ATTCGGCATG
CGCAGCATTC TGGCGGCGCG CAACAGCGAA GACGAATTGC AGAAGCACTA CCAGGCGCTG
TCCGCAGGCG CCAAGGAGCT GCGCATTCAG CGCAAACGTC GTCAGCACAT GCTCGACGAA
AAGATTCACG GGGCCACTGA ACACATCTGC CGCTCGAACA TTCGCGCTGC CAACATCTTC
GTCAGCGCGG AAACCTTCGG CTCGATGCTG TTCTTTGCGG TGATCGGCAT GGCCATCGCC
TTCCAGGCCA TGTGGCCGAC CACCGAGAAA ACCGTGCTGG GCGGCTTCGT GCTGGTGATG
CTGTACATGA AAGGCCCGCT GGAACGCCTG ATGACTGCCC TGCCCGGCAT CAGCCGCGCG
CAGATCGCCA TGCGCCGCAT CGCCGAGCTG TCGTGGAAAT TCTCCAGCCC CGAACCGCAC
CTGCTGGTCA GTGACCGCCC GACGTCGCTG GCCAGCATGC ACACGCTGGA ACTGCACAAC
CTGCGCTATG ACTACCCGCC GGTCGAGGGC AGCGACGCCT TTCACCTCGG CCCGGTCGAC
CTGAGCATCA AACAGGGCGA CATCGTGTTC ATCGTCGGCG AGAACGGCTG TGGCAAGACT
ACGCTGATCA AGCTGCTGCT GGGCCTGTAC ACCCCGCAAC AGGGTGAGAT CCGCCTGAAT
GGCCAGGCCG TTACCGCGGA AAACCTGGAT GACTACCGCC AGCTGTTCAC CACGATTTTC
GCCGACTACT ACCTGTTCGA CGAGCCGTTG CAGGGCCAGG CCGCGCTGCC GCAGGACGCG
GGCAAGTACC TGGAGCGCCT GGACATCGCG CACAAGGTCA GCATCGAGAA CGGTGTCTTC
ACCACCACCG ATCTGTCGAC CGGTCAGCGC AAGCGTCTGG CACTGATCAA TGCGTGGCTG
GACGAGCGTC AGGTGCTGGT CTTCGACGAG TGGGCCGCCG ATCAGGACCC GGCGTTCCGT
CGCGTGTTCT ACGCCGAGCT GCTGCCGGAA TTGAAGCAAC AGGGCAAGAC CATCATCGTG
ATCTCCCATG ACGACCGCTA TTTCTACGTT GCCGATCAGT TGGTGCGGAT GCAGACCGGG
CAGATTCAGG TCGAACAGGT TCGCAACGAA ACCCGCGATA AAACCATTAC GGCGTGA
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| Protein sequence | MTRTTESLAR ETLRILKPFW WLVALSTLLG IVSGLSVTGL LATINNAMNR PGGPDTQTAL
LFAGLCVLTL ACSTLSNLST NYVGQRVVAN LRRELAAKVL VAPIEQLERY RAHRLIPVLL
NDVNTISTFA LSVAPMVISF TVTLGCLAYL AVLSWQILAL TVLTVVLGTG AQYLAHAFGM
RSILAARNSE DELQKHYQAL SAGAKELRIQ RKRRQHMLDE KIHGATEHIC RSNIRAANIF
VSAETFGSML FFAVIGMAIA FQAMWPTTEK TVLGGFVLVM LYMKGPLERL MTALPGISRA
QIAMRRIAEL SWKFSSPEPH LLVSDRPTSL ASMHTLELHN LRYDYPPVEG SDAFHLGPVD
LSIKQGDIVF IVGENGCGKT TLIKLLLGLY TPQQGEIRLN GQAVTAENLD DYRQLFTTIF
ADYYLFDEPL QGQAALPQDA GKYLERLDIA HKVSIENGVF TTTDLSTGQR KRLALINAWL
DERQVLVFDE WAADQDPAFR RVFYAELLPE LKQQGKTIIV ISHDDRYFYV ADQLVRMQTG
QIQVEQVRNE TRDKTITA
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