Gene Psyr_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1959 
Symbol 
ID3367469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2252807 
End bp2259271 
Gene Length6465 bp 
Protein Length2154 aa 
Translation table11 
GC content63% 
IMG OID637652304 
Productamino acid adenylation 
Protein accessionYP_235040 
Protein GI66045199 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.992857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAGT TGCTTGACTC CGTTAAATCG CTGTCCGCCC GTGAACGCAA GGCGCTGGCG 
GTGCTGCTCA AGCGTCAAGG GGTGAATCTC TACGGGGTCA CGCCGATTGC CGTGAGGGAG
ACGCAGGCAC CGTCCGCGCT CTCTTACGCG CAGCAGCGGC AATGGATCAT CTGGCAACTG
GAGCCGCACA GCGCGGCCTA CAACATTCCG CTGGCGCTGC GCCTGCACGG CGCGCTGAAT
GTCGAGGCAT TGCGGCGCAG CGTGGAGCAA TTGATCGAAC GTCACGAAAC CCTGCGCACG
ACCTTCGAAC AGCAGGGCGA TGAAGCGCAG CAGGTGGTGC ACCCGGCGTC GCCGTTTGCG
CTCGGTGCCG AGCAACTGGC GGCTGGCGAA ACGGTCGAGC GTTATGTGGA TCAGGAAGTA
CAACGGCCTT TCGATCTGCA ACACGGACCG CTGTTGCGCG TCAGGCTGCT CAGGCTGAGC
GCGCAGGAGC ATGTACTGGT ATTGACCCAG CACCACATCG TCTCCGATGG CTGGTCGATG
CCGATCATGG TCGACGAACT GATGCAGTGC TATCAGGCCG CCACGCTGGG CCGCGAGATC
AAACTGGCGC CGTTGCCGAT CCAGTACGCC GACTACGCCC TCTGGCAGCG CAACTGGCTG
GAAATGGGCG AGCAGGAACG CCAGCTGGCG TACTGGAAGC AGCAACTGGG CGAGCAACAG
CCGATTCTGG AATTGCCCAC TGATCGGCCG CGTCCGGCAC TGCGCAATTA CGAAGGTGCG
CGACTCAATG TCAAACTGGA TGTCGCGCTG TTGAATAACC TCAAGACCCT GGCGCGCCAA
CAGGGCATCA CCCTGTTCAT GCTGTTGCTG GCCTCGTTTC AGACCCTGCT GCATCGCTAC
AGCGGTCAGG CCGATATACG CGTAGGCGTG CCGGTCGCCA ACCGTACCCG CAGCGAAACC
CAGGGGCTGA TCGGCTTCTT CGTCAACACC CAGGTGCTCA AGGCCGAATT CACCACGCAG
ACCACCGTGG CCGGGCTGTT GCAGCAGGTC AGACACACCG CCGTGCAGGC GCAGGCCCAT
CAGGACCTGC CGTTCGAACA ACTGGTCGAA GCCTTGCAAC CGCAGCGCGA CCTGAGCCGC
AGCCCGCTGT TTCAGGTGGC CTGCAACCAC CAGAGCGAAG GCCACAACCA GAGCCGTGAG
CTGGCAGGGC TGCGTCTGGA ATATCAGGTG TCCGACAAGC ACACCGCGCA GTTCGACCTG
ACCCTTGACA CCTGCGAACG CCCGGACGGC CTGACAGCCG CACTGACCTA CGCCACCGAC
CTGTTCGACG CATCGACCAT CGAGCGCATG GCCAGCCACT GGCGCAACCT GCTCAACGGC
ATGTGCCACG ACGTCAATCA GCGTATCGCT GACCTGCCAT TGCTGAGCGC CGAGGAACGC
CAGAACACCC TGCGTGACTG GAACCGCGAT CTTGCGGTCT ACCCAAGCGA GCACTGCGCG
CATCAACGCA TCGAAGCCCA GGCCGAGCGT AACCCGCAGG CCATCGCCCT GAGCTTTGGC
GATGAGCAAC TGAGTTACCG GCAGCTCAAC CAGCGTGCCA ACCAACTGGC GCACAAACTG
CGCGAACAGG GCGTCGGCCC GGATGTGCGC GTCGGGCTGG CCGCCGAGCG CGGTCTGGAG
ATGATTGTCG GTCTGCTGGC CATCCTCAAG GCAGGCGGCG CTTACGTGCC GCTGGACCCG
GATTATCCGC AGGATCGCCT GAGCTTTCTG ATGCACGACA GCGGTATCGA ACTGTTGCTG
ACCCAGGCGC ATCTGCTTGA AAGGTTACCG ATCCCTGCAC AGGTTAAGAG CCACGATCTG
GCTGACGCAC TGGACGGCTA CAGCACGGAA AACCCGCTCG ACAAGACCGC GCCGGACAAC
CTGGCCTACG TGATCTACAC CTCGGGTTCG ACCGGCAAAC CCAAAGGCAC CTTGCTCGCC
CATCACAACC TGATGCGCCT GTTCGCGGCC ACGGATGAGT GGTTCGAATT CAGCGAAAAG
GACGTGTGGA CGCTGTTCCA TTCCTTCGCC TTCGACTTTT CGGTGTGGGA GATTTTCGGC
GCGCTGCTGC ATGGCGGCCG ACTGGTGATC GTGCCCCGCG AAGTGACCCG TTCGCCGGAA
GATTTCCATG CGCTGCTGGT CGAACAGCAG GTTACGGTGC TCAACCAGAC GCCGTCGGCG
TTCAAGCAAC TGATGCACGT GGCCTGTGAT TCATCGCTAC CGATGTCGCT GCAGACAGTC
ATCTTCGGCG GCGAGGCGCT GGACGTCGCC AGTCTGAAGC CCTGGTTCGC GCGTTTCGGC
GATCAATCAC CGCAACTGAT CAACATGTAC GGCATCACCG AAACCACCGT GCATGTGAGC
TATCGACCGA TCACGCTGGC CGACACGCAG AACCCGGCCA GCCCGATTGG CGAGGCGATT
CCCGACCTGT CGTGGTACGT GCTGGACGCT GATTTCAACC CGGTCGCCCA AGGTTGCAGC
GGCGAGCTGC ACATCGGCCA TGCCGGTCTG GCGCGGGGTT ATCACAATCG TGCGGCGCTG
ACTGCCGAAC GTTTTGTTCC CGATCCGTTT TCCAGCGAGG GTGGCCGCCT GTATCGCACC
GGTGACCTGG CGCGTTATCG CGCGACAGGC GTGATCGACT ACGTCGGGCG CATCGACCAC
CAGGTGAAGA TTCGTGGCTT CCGCATCGAA CTGGGTGAAA TCGAAGCGCG GCTGCAAGCG
CACCCGGCCG TACGCGAAGT GAGCGTGCTG GCGCTGGACG GGCAATTGGC AGCGTACCTG
GTGCCTACTG AGCCTGATCA AGATCAGACA ACCCTGCGTG AAGCGCTGAA AAGCCAACTC
AGGGCGCGCC TGCCGGATTA CATGGTGCCC ACCCATTTCA TCGTCCTCGA CAGCATGCCG
CTGACCGCCA ACGGCAAGCT GGACCGCAAG GCGCTGCCTG CGCCGGACGC CAGTCAGTTG
CAGGCCACCT ACAGCGCGCC GCAGGGCGAG CTGGAGCAGC AACTGGCAGC GATCTGGGCC
GATCTGTTGA AACTCGAGCG GGTCGGGCGC AGCGACAACT TTTTCGAGCT GGGCGGGCAT
TCGCTGCTGG CCACTCAGGT GATTTCGCGC ATTCGTCAGC AGCTGGATGT CGAGCTGTCG
TTACGCGACC TGTTCGAAGC GCGTGATCTG GCGGCCTTCG CGCTGGCAGC GGGCGCAGGG
CAGGGCAACG GTGCGCCGCG CTTCATCAAG GCCGACCGCA AGCAGCCGCT GGGTCTGTCC
TACGCGCAGC AGCGTCAGTG GTTCCTCTGG CAGCTTGACC CGGAGAACAC GGCGTACATT
ATTCCCGCAG CCCTGCGCCT GCGCGGTTCG CTGGACATCG CGGCACTGGA GCACAGTTTC
AGCGCGCTGA TCGCACGTCA TGAAACCCTG CGCACGACCT TCCGCCAGCA GGGCGAGCAT
GCCGTACAGG TCATTCATGC GCCACGCGCC TTGACCCTGT CGGTCGAGTC GGTGCCCAGC
GGCCAGACCC TTGAAGCCTG CGTGCAGCAG GAAATGCATC GCCCGTTCGA TCTGGAGCAA
GGGCCGCTGT TGCGAGTCCG TTTGCTGAAC CTGAACACCG ACGAGCATGT GCTGATTCTG
ACCCAGCATC ACATTGTCTC CGATGGTTGG TCGATGCCGA TCATGGTCGA TGAATTGGTG
CGCCTTTACG AGGGTTACAG CCAGGGCCGT GCGGTGAGCT TGACCGCGCT GGACCTGCAA
TACGCGGACT ACGCGCTGTG GCAGCGGACC TGGATGGAGG CTGGCGAGCA GGCCCGGCAG
CTGGATTACT GGAAGCAGCA ATTGGGCGAT CAGCAGCCGA TTCTGGAGCT GCCCGCCGAT
TACCCGCGGC CAGTGGTGCA AAGCCATGCC GGTGCGCGGC TGGCAGTCGA GCTTGAGCCT
GCGCTGATCG ATGGCTTGAA GCAGGTCGCG CGGCAACAGG GTGTGACCCT GTTCATGCTG
TTGCTGGCGT CATTCCAGAG CCTGCTGCAC CGTCACAGCG GTCAGTCGGA CATTCGTGTC
GGCGTGCCGA TTGCCAACCG CAACCGCGCT GAAACCGAAG GCCTGATCGG CTTCTTCGTC
AACACGCAGG TGCTGCGTGC CGAGTTTGAC GTGCACACGA CGTTCAACGA GTTGCTGCAG
CAGGTCAAAC ACACCGCCCT GCAAGCCCAG GCGCATCAGG AGCTGCCCTT CGAGCAACTG
GTCGAAGCCC TGCAGCCCCA ACGCAGCCTC AGCCACAGCC CGCTGTTTCA GGTGATGTTC
AATCACCAGA GCCAGGCCAG CGCCGATGTC CGCGCGCTGC CCGGTCTGCA GGTCGAGGCA
CTGCTGCCGG ACAGTTACCC GGCGCAGTTC GACCTGACCC TGAACACTGC TGAACATGAC
GGTGGCCTGA GCGCTGGCCT GACCTACGCG ACAGCGTTGT TCGACCCGCG CACCATCGAG
CGCATGGCCG GGCACTGGCT GGCCTTGTTG CAGGCCATCT GCGCCAATGC CGCACAGCGG
ATCGCCGAAG TGCCGATGCT CGACAGGGCT GAACGGCAGC AGATTCTCCA TGACTGGAAC
GCCACAGCCG CAGACTTCCC CTGCGAAGAC TGCCTGCACA GCCTGATCGA AGCCCAGGTA
CGCGCCACAC CGCACGCGCC GGCGCTGATT TTCGCCGCCG AGCAACTGAG CTACGCGCAA
CTCAACGCCC GCGCCAATCA GCTTGCGCAT CGCCTGCGTG AGTCGGGCGT CGGCCCGGAC
GTGCTGGTTG GGATTTGCGT CGAGCGCAGC CTGGAACTGG TCATCGGTCT GCTGGCGATC
ATTAAAGCGG GCGGCGCTTA TGTACCGCTG GACCCGGATT ATCCCGAAGA TCGGCTGGTT
TACATGATGC AGGACAGCGG GATTGGCCTG CTGTTGACCC AGACGGCGTT ATTGGAGCGT
TTGCCGATTC CGCCCCAGGT GCAGAGCCTG TGCCTGGATC CGCACGGCGA CTGGCTGGAA
GGTTACAGCA CTGCCAACCC GGTCAACCTG AGTCATCCAT TGAATCTGGC TTACGTGATT
TACACCTCGG GTTCGACCGG CAAACCCAAG GGCGCGGGCA ACAGCCATCG TGCGCTGGTC
AACCGCTTGC ACTGGATGCA GAAGGCCTAC GGGCTGAACG AATCCGACAC CGTTTTGCAG
AAAACGCCGT TCAGTTTCGA CGTGTCGGTC TGGGAATTCT TCTGGCCGCT GATGACCGGC
GCACGCCTGG CCGTGGCGCT GCCGGGTGAT CATCGCGACC CCGAGCGGCT GGTGCAGACC
ATCCGTGAGC ATCAGGTCAC GACTTTGCAT TTCGTGCCGT CGATGCTGCA GGCGTTCATG
ACTCATCCGC AGGTGGAAAG CTGTAACACG CTGCGTCGGG TCGTATGCAG CGGTGAAGCA
CTGCCTGCCG AACTGGCCGC CCAGGTGCTC AAGCGTCTGC CGCTGGCCGG TCTGTACAAC
CTGTATGGCC CCACCGAAGC GGCCATCGAC GTTACCCATT GGACGTGCAG CACGGATGAC
ATCCTCAGCG TGCCGATCGG GCGGCCGATC GACAACCTGA AAACCCACAT CCTCGACGAT
GGCCTGCTGC CTGCCGCACA GGGCGTGGCG GCGGAGTTGT ATCTGGGTGG CGTTGGTCTG
GCACGCGGTT ATCACAACCG TGCAGCGCTG ACGGCTGAGC GCTTCGTGCC GGATCCGTTC
GGCGAACAGG GCGGCGGCAG GCTGTACCGC ACCGGTGATC TGGCGCGTTA TCGCGACGCG
GGCGTCATCG ATTACGCCGG GCGTATCGAC CATCAGGTGA AGATTCGCGG CTTGCGCATC
GAACTGGGCG AAATCGAAGC CAGCCTGCTG GAGCACGACA GCGTTCATGA GGCGGTGGTG
ATCGACGTTG ACGGCCCGTC CGGCAAGCAG CTGGCGGCGT ATCTGGTGGT CGAGCACCAT
GACGATCAGT TGCGTGATGC GCTCAAGGCC TTCCTCAAGG AATCGCTGCC GGATTACATG
GTGCCCACGC ATTTCATCGT GCTGGACAGA ATGCCGCTGA GCGCCAACGG CAAGCTCGAT
CGCAAGGCCC TGCCGAAACC GGACGCCAGC CAGTTGCAGC GCCAGTACGT CGCACCGTCC
ACAGAGCAGG AACAGCAGAT GGCGGCGATC TGGGCCGAGG TGCTGAAGGT CGAGCGTGTC
GGCCTGAGCG ACGATTTCTT CGAGCTCGGT GGCCACTCGC TGCTGGCGAC GCAGCTGATT
TCCAGAATCC ACAGCGGCCT GGGAATCGAC ATTCCGCTGC GCCTGATCTT CGAGAAACCG
CAATTGAACG AATTTATTCA GGCCTTCGCC GACAGTGGCC TGTCGCTGAC CGAGGACGGC
TTGTCCGATA TTGAAAAAAT GATGAATGAA ATGGCGGGTA TCTGA
 
Protein sequence
MQQLLDSVKS LSARERKALA VLLKRQGVNL YGVTPIAVRE TQAPSALSYA QQRQWIIWQL 
EPHSAAYNIP LALRLHGALN VEALRRSVEQ LIERHETLRT TFEQQGDEAQ QVVHPASPFA
LGAEQLAAGE TVERYVDQEV QRPFDLQHGP LLRVRLLRLS AQEHVLVLTQ HHIVSDGWSM
PIMVDELMQC YQAATLGREI KLAPLPIQYA DYALWQRNWL EMGEQERQLA YWKQQLGEQQ
PILELPTDRP RPALRNYEGA RLNVKLDVAL LNNLKTLARQ QGITLFMLLL ASFQTLLHRY
SGQADIRVGV PVANRTRSET QGLIGFFVNT QVLKAEFTTQ TTVAGLLQQV RHTAVQAQAH
QDLPFEQLVE ALQPQRDLSR SPLFQVACNH QSEGHNQSRE LAGLRLEYQV SDKHTAQFDL
TLDTCERPDG LTAALTYATD LFDASTIERM ASHWRNLLNG MCHDVNQRIA DLPLLSAEER
QNTLRDWNRD LAVYPSEHCA HQRIEAQAER NPQAIALSFG DEQLSYRQLN QRANQLAHKL
REQGVGPDVR VGLAAERGLE MIVGLLAILK AGGAYVPLDP DYPQDRLSFL MHDSGIELLL
TQAHLLERLP IPAQVKSHDL ADALDGYSTE NPLDKTAPDN LAYVIYTSGS TGKPKGTLLA
HHNLMRLFAA TDEWFEFSEK DVWTLFHSFA FDFSVWEIFG ALLHGGRLVI VPREVTRSPE
DFHALLVEQQ VTVLNQTPSA FKQLMHVACD SSLPMSLQTV IFGGEALDVA SLKPWFARFG
DQSPQLINMY GITETTVHVS YRPITLADTQ NPASPIGEAI PDLSWYVLDA DFNPVAQGCS
GELHIGHAGL ARGYHNRAAL TAERFVPDPF SSEGGRLYRT GDLARYRATG VIDYVGRIDH
QVKIRGFRIE LGEIEARLQA HPAVREVSVL ALDGQLAAYL VPTEPDQDQT TLREALKSQL
RARLPDYMVP THFIVLDSMP LTANGKLDRK ALPAPDASQL QATYSAPQGE LEQQLAAIWA
DLLKLERVGR SDNFFELGGH SLLATQVISR IRQQLDVELS LRDLFEARDL AAFALAAGAG
QGNGAPRFIK ADRKQPLGLS YAQQRQWFLW QLDPENTAYI IPAALRLRGS LDIAALEHSF
SALIARHETL RTTFRQQGEH AVQVIHAPRA LTLSVESVPS GQTLEACVQQ EMHRPFDLEQ
GPLLRVRLLN LNTDEHVLIL TQHHIVSDGW SMPIMVDELV RLYEGYSQGR AVSLTALDLQ
YADYALWQRT WMEAGEQARQ LDYWKQQLGD QQPILELPAD YPRPVVQSHA GARLAVELEP
ALIDGLKQVA RQQGVTLFML LLASFQSLLH RHSGQSDIRV GVPIANRNRA ETEGLIGFFV
NTQVLRAEFD VHTTFNELLQ QVKHTALQAQ AHQELPFEQL VEALQPQRSL SHSPLFQVMF
NHQSQASADV RALPGLQVEA LLPDSYPAQF DLTLNTAEHD GGLSAGLTYA TALFDPRTIE
RMAGHWLALL QAICANAAQR IAEVPMLDRA ERQQILHDWN ATAADFPCED CLHSLIEAQV
RATPHAPALI FAAEQLSYAQ LNARANQLAH RLRESGVGPD VLVGICVERS LELVIGLLAI
IKAGGAYVPL DPDYPEDRLV YMMQDSGIGL LLTQTALLER LPIPPQVQSL CLDPHGDWLE
GYSTANPVNL SHPLNLAYVI YTSGSTGKPK GAGNSHRALV NRLHWMQKAY GLNESDTVLQ
KTPFSFDVSV WEFFWPLMTG ARLAVALPGD HRDPERLVQT IREHQVTTLH FVPSMLQAFM
THPQVESCNT LRRVVCSGEA LPAELAAQVL KRLPLAGLYN LYGPTEAAID VTHWTCSTDD
ILSVPIGRPI DNLKTHILDD GLLPAAQGVA AELYLGGVGL ARGYHNRAAL TAERFVPDPF
GEQGGGRLYR TGDLARYRDA GVIDYAGRID HQVKIRGLRI ELGEIEASLL EHDSVHEAVV
IDVDGPSGKQ LAAYLVVEHH DDQLRDALKA FLKESLPDYM VPTHFIVLDR MPLSANGKLD
RKALPKPDAS QLQRQYVAPS TEQEQQMAAI WAEVLKVERV GLSDDFFELG GHSLLATQLI
SRIHSGLGID IPLRLIFEKP QLNEFIQAFA DSGLSLTEDG LSDIEKMMNE MAGI