Gene Psyr_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1957 
Symbol 
ID3367467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2241385 
End bp2244795 
Gene Length3411 bp 
Protein Length1136 aa 
Translation table11 
GC content65% 
IMG OID637652302 
Productamino acid adenylation 
Protein accessionYP_235038 
Protein GI66045197 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG AACACGCCCA GAAACTCGCT CGCCGTTTTG TCGAGTTACC CCTTGAAAAA 
CGCCGCCTGT TCCTCGACGG CATGCGCAAG GAGAACATGG ATTTCTCGCT GTTCCCGATC
CCTTCCTGTG CCGGGCTGGC CGAGCGTGAC GGTCTGTCCT ATGCCCAGCA ACGCATGTGG
TTTCTCTGGC AACTGGACCC GCACAGCGCG GCCTACAACC TGCCGATGTC GGTGTGCCTG
AACGGTCCGC TGGAGCTGCC TTTGCTGGAG CGGGCTTTCA GTGCGCTGGT CGAACGACAT
GAAAGCCTGC GCACCACCTT CGGCCAGGAG GGCGACCGGG CGTTTCAGCG TGTCGCGCCG
CCAGCGCCAG CGAGCATCCG CCTGACCGAC CTGAGCGCCT TGCCGCCCGA GCAGCGCTGG
GCCAGTGCGC GTCAGGCCAT GGCCGAACAG GCCGCGCAAA CCTTCGATCT GCAGCGCGGG
CCGCTGTTCA CTGTGCAGGT ACTGCGTCTG GCCGAACAGG AGCACCTGCT GCTGCTCAAC
CTGCACCACA TGATCACCGA TGGCTGGTCG ATGAACGTGC TGATCGACGA ATGGCTGCGC
GGCTACGACG CGCTGCTGGC CGGCAAACCG CTGCCTTTTC AGCCGCTGCT CGTGCAGTAC
CGCGATTATG CGGTCTGGCA ACGCAGCTGG CTGGAAGCCG GTGAGCAGGA GCGTCAGCTG
GACTACTGGC GCAGCCACCT GGGCGAAGAG CATCCGCTGT TGGAGCTACC CACCGACCGT
CCGTATCCGG CCTTGCCCAG CCACGACGGC GCCCGCCTGG AGCTGGCACT GGAGCCCGAG
CTGCTGCGCG ACCTGAAAAG CCTCGCGCAG CGCCAAGGCG TGACCCTGTT CGTGGTGCTG
CTGGCGGCCT TCAAAAGCCT GCTGCATCGC TACAGCGGGC AGACCGATAT TCGTGTCGGC
GGCCTGATCG CCAACCGCAC CCGCAGCGAA ACCGAAGGGC TGATCGGCTG CTTCATCAAT
ACTCAGGTAC TGCGCAGTGA AGTGACGGCG CAGACCCGCT TCGTCGATCT GTTGAACATC
GTGCGCGACG CCTCGACCGG TGCCCAGGCA CATCAGGAGC TACCGTTCGA CGCCATCATC
GACGCCCTGC AGCCGGAGCG CAGTCAGAGC CATAACCCTT TATTTCAGGT GATGTTCAAT
CACCAGCCGG TGGTGGCCGA CCTGCTCGAC AAACAGTTGA GCGGCGGCCT GCGCGTGGCC
AATCTGCCTG CCGGGCAACA GGCATTGGCG CAGCGCTCGC ACGCTGCCGC CAGCGACCTG
ATGCTGGCCA CCAGCGGTGA AGGCGAGCAA CTGCATGCCG CCTTCACCTA CGCCACCGAC
ATCTTTGACG AGTCGACCAT CGCTCGCCTG GCCGGGCACT GGCGCAACCT GTTGGCCTCT
GTCTGTGCCG ACCCGCTGCA GACCATCGCC GAGCTGTCGA TGCTCTCGGC CGACGAGCGC
ACGCAACTGC TGGATGTCGA CAACGCCACC AAAGCCGACA CCACAACTCC CGCGCATCGC
CAGTTCGAAG CGCAAGTACA ACGCACACCG GACGCACTGG CGCTGATCCT CGCCCGTGAA
GGTCAATCGC CGAGCCTGAG CTACACCGAA CTGAACCAGC GCAGTAACCG TCTGGCCTGG
CAACTGCGCG AGCAGGGTGT CGGTGCGGAC GTGCTGGTCG GCGTGGCGCT GGGCCGCTCG
CTGGACATGC CCGTGGCGCT GCTCGCCGTG CTCAAGGCGG GCGGCGCCTA TGTGCCACTG
GACCTGAACG CGCCGAGCGA ACGCTTGCGT CATGTAGTCG AGGACAGTGG CGTGAAACTG
CTGCTGACCC ATAGCGATCA GCTGACCGGG CTGCCTGAAC TGGCTGATAT TCAATGCCTG
TGCATCGATC GGATGAACAG CGAAACCGCC AGCGTGCAAA ACCTCGACGG CCCGATCGAT
CCGGCCAGTC TGGCCTACGT GATCTACACC TCGGGGTCGA CCGGGCGGCC TAAAGGCGTG
GCGATCAGTC ATGCGGCGCT GGCCGAATTC GTCACCCTGG GTGCTGACTA CAGTGACCTG
CACGAAGGCG ACCGGGTCCT GCAATTCGCC ACCCACAGCT TCGACGGCTT CGTCGAGCAG
TTCTACCCAC CGTTGTGTCG CGGTGCGGCC GTTGTGCTGC GTGACGAACG CCTGTGGGAC
AGCGCCACCT TCCATCAGGC CATCGTCGAG CACGGCGTGA CCCTCGCCGA CTTGCCCGCG
GCCTATTGGC TGACGCTGGT TCAGGACTTC GCCGCCAGCC CGCCCGTGCA TTACGGCGCG
CTACGCCAGG TGCATGTTGG CGGCGAAGCC ATGGCCGTCG AGGGGCTGCG CCTGTGGCAC
AAGGCCGGGC TCGGGCATGT ACGCCTGCTC AATACCTATG GCCCGACCGA AGCCACCGTG
GTGTCGAGCA TCCATGATTG CAGCACGCTG ACCCCGCAGC AGGTGTCCTG GCGCGGCGTG
CCGATTGGCC ATGCGCTGGC AGGACGACGC CTGTACGTTC TCGACGATCA AATGAACCTG
CTGCCGCAAG GTGCGGTGGG CGAGCTGTAC ATCGGTGGTC CTGGTCTGGC GCGCGGTTAT
CACGCCCAGC CCGGTCTGAG CGCCGAACGT TTCGTCGCCG ATCCGTTTGG CAGCGGTGAG
CGCCTGTACC GCAGCGGCGA CCGCGCCCGA CTGCGTGCCG ATGGCGCTGT CGAGTACATC
GGCCGGGTCG ATCATCAAGT GAAGATTCGC GGTTTCCGTA TCGAGCTGGG CGAGGTCGAA
TCGCGCCTGC AGCAATGCAC GGGCGTGCGC GAGGCCGTGG TGCTGGCCGT CGAACTGGCG
GGCAGCACGC AGTTGGTCGC CTACGCCGTG CCTGACGTTG CCGCCTCCAC AGAGGCCGAA
CAGTTGGCCC TGCGCCAAAG CATCCGCAGC CAGTTGCAAG CCTTCCTGCC GGATTACATG
GTGCCGACGC ACATGCTGCT GTTGCCAGAG CTGCCCCTGA CGCCCAGCGG CAAGCTGGAC
CGCAAGGCAT TGCCGACCCC CGACGCAAGC CAGTTGCAGG CGCGTTATCG GGCGCCGCGC
AGCGAGGTGG AAATCTGCCT GGCGGCCATC TGGCAGGACG TCCTGCACGC ACCCCAGGTG
GGCCTGGACG ATCACTTCTT CGAACTGGGC GGGCACTCGT TGCTCGCCGC ACAAGTCATC
GCCCGGATCA AGACGCAGCT GGGCGTCAGC CTGCCGCTGC GCACCCTGTT TGAAAAACCG
CTGCTCAGTG AGCTCGCCGT CGAAGTGGCA GCGCTGACCG AAAACAGCAC GGACAACGAC
TGGAGCGACA TGGACCAGTT CATGGATTCA CTGGAGGAAT TCGGCGCATG A
 
Protein sequence
MNPEHAQKLA RRFVELPLEK RRLFLDGMRK ENMDFSLFPI PSCAGLAERD GLSYAQQRMW 
FLWQLDPHSA AYNLPMSVCL NGPLELPLLE RAFSALVERH ESLRTTFGQE GDRAFQRVAP
PAPASIRLTD LSALPPEQRW ASARQAMAEQ AAQTFDLQRG PLFTVQVLRL AEQEHLLLLN
LHHMITDGWS MNVLIDEWLR GYDALLAGKP LPFQPLLVQY RDYAVWQRSW LEAGEQERQL
DYWRSHLGEE HPLLELPTDR PYPALPSHDG ARLELALEPE LLRDLKSLAQ RQGVTLFVVL
LAAFKSLLHR YSGQTDIRVG GLIANRTRSE TEGLIGCFIN TQVLRSEVTA QTRFVDLLNI
VRDASTGAQA HQELPFDAII DALQPERSQS HNPLFQVMFN HQPVVADLLD KQLSGGLRVA
NLPAGQQALA QRSHAAASDL MLATSGEGEQ LHAAFTYATD IFDESTIARL AGHWRNLLAS
VCADPLQTIA ELSMLSADER TQLLDVDNAT KADTTTPAHR QFEAQVQRTP DALALILARE
GQSPSLSYTE LNQRSNRLAW QLREQGVGAD VLVGVALGRS LDMPVALLAV LKAGGAYVPL
DLNAPSERLR HVVEDSGVKL LLTHSDQLTG LPELADIQCL CIDRMNSETA SVQNLDGPID
PASLAYVIYT SGSTGRPKGV AISHAALAEF VTLGADYSDL HEGDRVLQFA THSFDGFVEQ
FYPPLCRGAA VVLRDERLWD SATFHQAIVE HGVTLADLPA AYWLTLVQDF AASPPVHYGA
LRQVHVGGEA MAVEGLRLWH KAGLGHVRLL NTYGPTEATV VSSIHDCSTL TPQQVSWRGV
PIGHALAGRR LYVLDDQMNL LPQGAVGELY IGGPGLARGY HAQPGLSAER FVADPFGSGE
RLYRSGDRAR LRADGAVEYI GRVDHQVKIR GFRIELGEVE SRLQQCTGVR EAVVLAVELA
GSTQLVAYAV PDVAASTEAE QLALRQSIRS QLQAFLPDYM VPTHMLLLPE LPLTPSGKLD
RKALPTPDAS QLQARYRAPR SEVEICLAAI WQDVLHAPQV GLDDHFFELG GHSLLAAQVI
ARIKTQLGVS LPLRTLFEKP LLSELAVEVA ALTENSTDND WSDMDQFMDS LEEFGA