Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1950 |
Symbol | |
ID | 3367460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2235206 |
End bp | 2235970 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652295 |
Product | ABC transporter |
Protein accession | YP_235031 |
Protein GI | 66045190 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.373165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTG CACAGCACCT CGACATCGTC AGCCAGGGGC CGGGCATCGA ATTCAATCAG GTCAGCCTGA CCCTCGGGCG CACCACGATT CTCGATCAGG TTCACTTCAA TGTGCGCGCC GGCAGCGTAC ACGCACTGGT CGGCCCGAAC GGCGGTGGCA AAAGTTCGCT GATCAAGACC CTGCTCGGGC AGACACCGCA TCAAGGTCAG TTGAGCCTGC TGTGGCCTGC CGCTCCGGGG CTGATCGGCT ATGTTCCACA GGCGCTGGAG TTCGACCGTG GCCTGCCGAT GACCGTGGAC GATTTCATGG CGGCCATGTG TCAGCGACGC CCGGCGTTTC TGGGCTTGTC GAAGCACTAC GCGGCAGCGA TTGGCGAGGC ATTGGAACGG GTCGGCATGC AGGACAAGCG CAAACGGCGC ATGGGCGCGC TTTCCGGTGG CGAACGGCAG CGCGTATTGC TGGCGCAGGG GCTGATTCCT GCGCCGCAAT TGCTGGTGCT GGATGAGCCG ATGTCGGCGC TGGATGAGGC GGGTATTCAG GTGTTTGAGC GGTTGTTGGG TGACTGGCGC CGAAGCGGAG TCACGGTCCT GTGGATCGAG CATGATCTGG ATGCCGTCAG GCGTCTGGCC GATCAGGTCA CAGGGCTCAA CCGACGCATC CTGTTCGATG AACCGGCCGC CACCGCGCTG ACCCCGGAAC GGCTGCTGAC CCTGTTTTCC GCGCACCCGC GCACGATGGA TAGCAGCGCC GGGAGGATCG CGTAA
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Protein sequence | MTAAQHLDIV SQGPGIEFNQ VSLTLGRTTI LDQVHFNVRA GSVHALVGPN GGGKSSLIKT LLGQTPHQGQ LSLLWPAAPG LIGYVPQALE FDRGLPMTVD DFMAAMCQRR PAFLGLSKHY AAAIGEALER VGMQDKRKRR MGALSGGERQ RVLLAQGLIP APQLLVLDEP MSALDEAGIQ VFERLLGDWR RSGVTVLWIE HDLDAVRRLA DQVTGLNRRI LFDEPAATAL TPERLLTLFS AHPRTMDSSA GRIA
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