Gene Psyr_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1937 
Symbol 
ID3367447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2210190 
End bp2210621 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID637652282 
Producthypothetical protein 
Protein accessionYP_235018 
Protein GI66045177 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.764687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAG TCCTGGTTCC TTTCGACGGC TCCAAGCACG CCATGCGTGC CCTGGGCTAT 
GTCATCGAGC TGTCTGGCGA GCTCAACAAG CCGCTTGAAG TGCATGTGCT CAACGTGCAG
GCCAGCCCCA TCGATTACAG CCTTTATCTG GCCCCCGACA TGATTGATGG CGTCAAGGCC
GGCCTGACCA ATGAAGGCAA GCGGGTGCTG GCTGATGCGG TTGCGTTGTT GACTGCTGCT
GGTGTGCCGT TTCTGGCCCA CGTCGATCTG GGTAATGTGG CCGAACAGGT CGAGGCCGCA
GTTCAGCGAC TCGACTGCGA CGCCGTGGTC ATGGGCACCC GCGGGCTGGG CAACATTGGT
GGCCTGCTGC TGGGCTCGGT GGCCACGGGG GTGATCCACG AAGCATCGGT GCCGGTGACG
CTGATCAAAT AA
 
Protein sequence
MHKVLVPFDG SKHAMRALGY VIELSGELNK PLEVHVLNVQ ASPIDYSLYL APDMIDGVKA 
GLTNEGKRVL ADAVALLTAA GVPFLAHVDL GNVAEQVEAA VQRLDCDAVV MGTRGLGNIG
GLLLGSVATG VIHEASVPVT LIK