Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1930 |
Symbol | |
ID | 3367440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2203955 |
End bp | 2204692 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637652276 |
Product | hypothetical protein |
Protein accession | YP_235012 |
Protein GI | 66045171 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.73851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.035544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCTA GATCGATATC GCTATTTCAC TTTACTAAAA GTATGGAAGT CCTAAAGTCA GTTATAAAGG AAGGTTTTTG GCCTAGGTAC TGCTTGGAAG ACGTTCAGTG GCAAGGGATT TCATCAAATG AATTTATAGC GTTTCCGATG GTTTGTTTTT GTGATATTCC CATGAGTCGC ATATCGGAAC ACGTAGGGTT TTATGGTTCG TTTGGTATAG GTCTGACCAA AGAGTGGGGC GCAAAAAATA ACTTAAATCC GGTTATTTAC TTTGCAAGTG ATAATCCATT GCACGGTGCT ATTCGATCGC TTACAAGTCT CGTACTAGAT CTTGAAGAGC AAAAGCAAGA TGTTGGATTG AAAAATCTTC GATATATTCT TGCGCACTCT AAACCTACGC ATGGCAGGAT GATTATTTCC GGGAGTTCTT TGACAAAAGA CTTTTACCAA GAGTCGGAGT GGCGATATGT TCCGCAAAAT GATGAAATTG AAGAGTATCT TAGCTATCAA GATCATCAGA CCGAAAGTAA GCTGGAAGCG AATAACTATA TTACTGGAAA ACTATGCAGG TTAAAGTTTT TGCCAAGTGA TGTGAAGTAT ATTTTCGTGC CTACAGATGC TGAGATTCCA TCAATCATGA ATTTTATCCA GTCAGAGTTG GATTACTATC CAAATGCGGA TATAAAACTT TTGATGTCTA GAGTTACTTC GTTAGAAAGT GTCTCGCAGG ATGTATGA
|
Protein sequence | MQPRSISLFH FTKSMEVLKS VIKEGFWPRY CLEDVQWQGI SSNEFIAFPM VCFCDIPMSR ISEHVGFYGS FGIGLTKEWG AKNNLNPVIY FASDNPLHGA IRSLTSLVLD LEEQKQDVGL KNLRYILAHS KPTHGRMIIS GSSLTKDFYQ ESEWRYVPQN DEIEEYLSYQ DHQTESKLEA NNYITGKLCR LKFLPSDVKY IFVPTDAEIP SIMNFIQSEL DYYPNADIKL LMSRVTSLES VSQDV
|
| |