Gene Psyr_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1930 
Symbol 
ID3367440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2203955 
End bp2204692 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content39% 
IMG OID637652276 
Producthypothetical protein 
Protein accessionYP_235012 
Protein GI66045171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.73851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.035544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTA GATCGATATC GCTATTTCAC TTTACTAAAA GTATGGAAGT CCTAAAGTCA 
GTTATAAAGG AAGGTTTTTG GCCTAGGTAC TGCTTGGAAG ACGTTCAGTG GCAAGGGATT
TCATCAAATG AATTTATAGC GTTTCCGATG GTTTGTTTTT GTGATATTCC CATGAGTCGC
ATATCGGAAC ACGTAGGGTT TTATGGTTCG TTTGGTATAG GTCTGACCAA AGAGTGGGGC
GCAAAAAATA ACTTAAATCC GGTTATTTAC TTTGCAAGTG ATAATCCATT GCACGGTGCT
ATTCGATCGC TTACAAGTCT CGTACTAGAT CTTGAAGAGC AAAAGCAAGA TGTTGGATTG
AAAAATCTTC GATATATTCT TGCGCACTCT AAACCTACGC ATGGCAGGAT GATTATTTCC
GGGAGTTCTT TGACAAAAGA CTTTTACCAA GAGTCGGAGT GGCGATATGT TCCGCAAAAT
GATGAAATTG AAGAGTATCT TAGCTATCAA GATCATCAGA CCGAAAGTAA GCTGGAAGCG
AATAACTATA TTACTGGAAA ACTATGCAGG TTAAAGTTTT TGCCAAGTGA TGTGAAGTAT
ATTTTCGTGC CTACAGATGC TGAGATTCCA TCAATCATGA ATTTTATCCA GTCAGAGTTG
GATTACTATC CAAATGCGGA TATAAAACTT TTGATGTCTA GAGTTACTTC GTTAGAAAGT
GTCTCGCAGG ATGTATGA
 
Protein sequence
MQPRSISLFH FTKSMEVLKS VIKEGFWPRY CLEDVQWQGI SSNEFIAFPM VCFCDIPMSR 
ISEHVGFYGS FGIGLTKEWG AKNNLNPVIY FASDNPLHGA IRSLTSLVLD LEEQKQDVGL
KNLRYILAHS KPTHGRMIIS GSSLTKDFYQ ESEWRYVPQN DEIEEYLSYQ DHQTESKLEA
NNYITGKLCR LKFLPSDVKY IFVPTDAEIP SIMNFIQSEL DYYPNADIKL LMSRVTSLES
VSQDV