| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1926 |
|---|
| Symbol | |
|---|
| ID | 3367436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2199377 |
|---|
| End bp | 2200087 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637652272 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235008 |
|---|
| Protein GI | 66045167 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.445782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0148032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA TGGTTGGAGA TACCCGTACA TTGTCTGCCT GTGCGTTGGG CGATGAGTTC
ATCCTGCAAG AGCTTGCACA ATTAAGAGAC GAACTGATCC AGCAGGTTTT CGATCATCCT
TTTCTGGTTC AGTGCCGTGC GGCAAGCATG CCGATAGACC GGCTGAAGAA CTTTCTCGTG
CAACAAGGAA AATACAGCCG TTATTTCACG CGGTACATCT GCCAGTTAAT GAGTCATCTT
GAGGGTGATG AAGATATTCT GGCAGTGTTC GAAAATCTTT TCGAAGAACT GGGTTTTGGT
GAAGTCGCCG AACCCACTCA TTCGGCTATC TACCGTGAGA TGTTGTGCTC CTTCGACCTG
AACCTGGAGG CGCACGCCAC GCTTCCTTCC ACGCAGCACC TCATCGATAC AATGATGAAC
TTTTGCAAAC AGCCCAATGG TATTTATGGA CTCTCGGCGT TGTGCCTGGG GGCCGAGGCC
ATTGTTCCTC ATCTGTACAG TGACATTGTC ACTGGCTTCT CGGGTCAGGG CGTTGCTGCA
GAGAGGCTCA GATTTTTCAC GTTGCATATC GAATGTGACG ATGGTCACGC GGACACCCTG
TTGGCGATTC TGTCGCGTCT GGTGATGGAA AAACCGACTC GTTTTGAAAT AGTCCGGCAC
GCCGCCGTCA TGATGATCAA GGCGCGACTT GAGTTTCTCG ATAAACTTTG A
|
|---|
| Protein sequence | MDLMVGDTRT LSACALGDEF ILQELAQLRD ELIQQVFDHP FLVQCRAASM PIDRLKNFLV
QQGKYSRYFT RYICQLMSHL EGDEDILAVF ENLFEELGFG EVAEPTHSAI YREMLCSFDL
NLEAHATLPS TQHLIDTMMN FCKQPNGIYG LSALCLGAEA IVPHLYSDIV TGFSGQGVAA
ERLRFFTLHI ECDDGHADTL LAILSRLVME KPTRFEIVRH AAVMMIKARL EFLDKL
|
|---|
| |