Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1921 |
Symbol | |
ID | 3367431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2194112 |
End bp | 2195221 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637652267 |
Product | Alpha/beta hydrolase fold |
Protein accession | YP_235003 |
Protein GI | 66045162 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.616867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00212395 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGGA TTGCTTCTGC TGCGTTGTTT ATTGCGTCCT GTACCACCGC CTTAATGGTG AGCGCGGCGC CACTGCCTGC CAGTTCAGCC GCAAATATAG ACGGTGTGGA AATTCATACC GTCACGCTAA AAACTGACGC GATGAAGATG GCCCTCTGGC GTGATTCGCC GAAAGGGACC CACACTCAAA CAATGAAAGA GTCACAAGTT GTTCTGTTTA TTCATGGCGC AACCATTTCA GGTAATCTCT CGGCCGGGTA CGCCATCGAC GGTTATTCCT GGGCCCAAGA CGTCGCCAAT TCAGGGCGTG AAGCCTGGGT GGTGGACCTG CCGGGGTATG GTCGCTCTGA TGATTATTCG GAAATGCGCG AGGCCAGTCC ACACGCCAAC GGTGAATCGG TGGGCAATGC CAAAAGCCTG GTGCCCGTGA TTGATGCTGC CGTCGACTAT GTATTGAAGT TTACCGGTGC AAAAAAACTG ACGATTATCG CCACGTCCAG GGGCGCGATA CCAGTGGGGT ATTACCTGAG CGCGCACGGC GAAAAAGTAG ACAAGGTCGT GTTCAACTCG CCCATCGTCC GGCGTGATAC CACAAGCCCG GAGATTGTCC GAGGCTTGTT CGGCAGTGCC GAAAGACCCG ACAAGAGCTT TTATGAGATT CCGGTCGACA AGCGATTGTC CATGATAGAA GAAGACCGTC CGGCGGGCAC CGAGACGCAG CTTGAACAAG GGTTTATAAA AAACTGGCCC GGTGATGCAG CGCTGGAAAG AGCGCATCAA AAGAACATGA TTAAAGTACC CGGCGGCTTT GCCCAGGATA TCTACGATGC CTGGCATGGC GTGTATTGGG ACCCTGCCAC AATCACGGTG CCTGTGTTAA TCACACGCGG TGATTATGAT CATGTGCTGA CCACCGCGGC GGATATCGAC TGGCTGTACA CACACCTGAG CAATGCTTCC AGTAAACGGT ACGTGCTGAT CGATAAAGGC ACCCACGCCA TGTTATTTGA AAAAAAGCGT TTCGAACTCT ATCGCGAAGT ACGGGTTTTT CTGGAAGGCT CATATAACCG ATTGTCACTG GCCTGTAGTT TTTGCGGCGG CCGCAACTAA
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Protein sequence | MKRIASAALF IASCTTALMV SAAPLPASSA ANIDGVEIHT VTLKTDAMKM ALWRDSPKGT HTQTMKESQV VLFIHGATIS GNLSAGYAID GYSWAQDVAN SGREAWVVDL PGYGRSDDYS EMREASPHAN GESVGNAKSL VPVIDAAVDY VLKFTGAKKL TIIATSRGAI PVGYYLSAHG EKVDKVVFNS PIVRRDTTSP EIVRGLFGSA ERPDKSFYEI PVDKRLSMIE EDRPAGTETQ LEQGFIKNWP GDAALERAHQ KNMIKVPGGF AQDIYDAWHG VYWDPATITV PVLITRGDYD HVLTTAADID WLYTHLSNAS SKRYVLIDKG THAMLFEKKR FELYREVRVF LEGSYNRLSL ACSFCGGRN
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