| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1904 |
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| Symbol | |
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| ID | 3367414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2179308 |
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| End bp | 2180558 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652250 |
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| Product | hypothetical protein |
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| Protein accession | YP_234986 |
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| Protein GI | 66045145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.745747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00175073 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGAC CTCTTTTTGT ATTTATCGGC ACGCGCTACA CCCGTGCGAA GCGACGCAAT
CATTTTGTTT CCTTCATCTC CCTGACCTCC ATGATCGGCC TCGCCCTGGG CGTTGTGGTC
ATGATAGTCG TGTTATCGGT GATGAACGGT TTCGATCACG AAATGCGTAC CCGCGTGCTC
GGCATGGTGC CGCACGCGAC CATCGAATCG GCTGACCCGA TCACCGACTG GCGCGGTCTG
GCCGCGAAGG TTCAGGAAAA CCCGCAGGTG CTGGCCGTTG CGCCGTTCAC CCAGATGCAG
GGCTTGCTGA CCCACGACGG CAAGGTCCAG AAAGTGCTGC TCAACGGTAT CGACCCGCTT
GAAGAGCGCA AGGTCTCGAT CATTGACCAC TTCATCAAGC AGGGCCAGCT CGACAGTCTG
TCGCCCGGCA GCTTCGGCAT CATGATCGGC GACAAGGCCG CGGCCAAGCT GGGCGTCGGC
ATCGGCGACA AGCTGACCTT CGTTGCGCCT GAAGTGACGG TGACGCCAGC CGGGATGTTC
CCGCGCATGA AGCGCTTCGA GGTGACCGGC ATCTTTCACG TCGGCGCCGG CGAAATCGAC
GGCTTCCTGG GGCTGACCAA CCTTGATGAC CTGGGCCGTC TGCACCGCTG GAAGCCCAAT
CAGGTGCAGG GCCTGCGTCT CAAGTTCGAC GACCTGTTCG CCGCGCCACG CACTTCGTGG
GAAATCGCGC AGAAGCTGGG CGAAAACAAC TTCTACTCGC GTGACTGGAC GCGCACCCAC
GGCAACCTGT ATCAGGCCAT CCGCATGGAA AAAGCCATGA TCGGTCTGTT GCTGCTGCTG
ATCGTGGCGG TGGCGGCCTT CAACATCATT TCCACGCTGG TGATGGTGGT CAATGACAAG
AAGGGCGACA TCGCGATTCT GCGTACCCTG GGTGCTACGC CGCGACAGAT CATGGCGATA
TTCATGGTCC AGGGCACGGT GATCGGCGTG GTTGGCACGC TGATCGGCGC GGCACTGGGG
ATTCTGGCGG CGCTCAATGT CAGTGCTGCC ATTGCTGCAC TCGAAGGGCT GATCGGCCAC
AAGTTTCTCA ACGCCGACGT CTACTTCATT GATTACCTGC CTTCGCAACT GATGGCCCAG
GACGTGTTCC AGGTCTGTGG TGCAGCGTTG GTCCTGAGTT TCCTCGCCAC CCTGTATCCC
GCCTGGCGTG CTGCGCGCAC CCAGCCGGCG GAGGCGTTAC GTTATGAGTG A
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| Protein sequence | MFRPLFVFIG TRYTRAKRRN HFVSFISLTS MIGLALGVVV MIVVLSVMNG FDHEMRTRVL
GMVPHATIES ADPITDWRGL AAKVQENPQV LAVAPFTQMQ GLLTHDGKVQ KVLLNGIDPL
EERKVSIIDH FIKQGQLDSL SPGSFGIMIG DKAAAKLGVG IGDKLTFVAP EVTVTPAGMF
PRMKRFEVTG IFHVGAGEID GFLGLTNLDD LGRLHRWKPN QVQGLRLKFD DLFAAPRTSW
EIAQKLGENN FYSRDWTRTH GNLYQAIRME KAMIGLLLLL IVAVAAFNII STLVMVVNDK
KGDIAILRTL GATPRQIMAI FMVQGTVIGV VGTLIGAALG ILAALNVSAA IAALEGLIGH
KFLNADVYFI DYLPSQLMAQ DVFQVCGAAL VLSFLATLYP AWRAARTQPA EALRYE
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