| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1900 |
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| Symbol | |
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| ID | 3367410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2175268 |
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| End bp | 2176251 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652246 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_234982 |
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| Protein GI | 66045141 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0470601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0133899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTGCTGG TGTGCAGTGG TTGTGGTCAG GAACGCAAGC TGGAAAGCTT TGGCGGGCCG
ACCATGGGCA GTCATTATTC CGTGGTGTAT GCGCGCGCTT CCGGGCAGCC GGAGCCTGCG
GCTGTGCGTC CCGAGGTCGA AGCGATTCTA GACGAGGTCG ATCAGCAGAT GTCGCTCTGG
CGCGCGGATT CGGATATCGA GCGCTTCAAT GCGTTGCCTG CCAATAGCTG CCAGGTGATG
CCGGAACCGG TCTTGAAACT GATCGGCGTG GGCGAACAGT TGGCGCAGGA GAGCGACGGA
GCCTTCGATC TGACGGTCAA GCCGTTGATG GACCTGTGGG GGTTGGGGCC TCATACGCTG
TTCGAGCAGA TGCCGCTGGT GCGGCAACTG GCCCGGACTC AGGCGCTGGT CGGTTATCGC
AACCTGCGCA TCGTCGGCGA CCGGTTGTGC AAGAGTGCCG CCGTGCAAGT GGACCTCAAC
AGCATCGCCG CCGGCTATGC GGTCGATCGG ATCAGCGAAC GGATGGACGC GCTCGGCTTG
CACGATTATC TGGTGCAGGC CACGGGTGAA CTGAAAGTCA GCGGGCTCAA GCCCGACGGC
TCGCCCTGGC GGGTGACCCT GGACGCGCCG CTCGATGATG GCACTGTCAC GCAAAAAGTG
TTTCCGCTGA AAGGCTACGC CGTGTCTACG TCGGGCGACT ATCGTCGCTA CGTCGACCAT
GCCGGGTGGC GCATTTCCGA TACGCTCGAT GCCTTGAGCG GTAAGCCGAT CAGCCACAGT
CTGGCGTCGG TGACGGTCAT TCATCCCTCG GCGCTGATGG CTGACGGTCT GTCTTCCCTG
CTGTTGATTC TCGGCCCGCA GCGCGGTTGG GATTATGCGC AAGAACATAA AATCCCTGCT
TTTTTTGTGA TTCGTGCCGA TAAGCGCTTT ATCATCCGCA GCAACGCGTC GTTTGATCAT
CTGGTTGTGC AGCAGCCGCG CTAA
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| Protein sequence | MLLVCSGCGQ ERKLESFGGP TMGSHYSVVY ARASGQPEPA AVRPEVEAIL DEVDQQMSLW
RADSDIERFN ALPANSCQVM PEPVLKLIGV GEQLAQESDG AFDLTVKPLM DLWGLGPHTL
FEQMPLVRQL ARTQALVGYR NLRIVGDRLC KSAAVQVDLN SIAAGYAVDR ISERMDALGL
HDYLVQATGE LKVSGLKPDG SPWRVTLDAP LDDGTVTQKV FPLKGYAVST SGDYRRYVDH
AGWRISDTLD ALSGKPISHS LASVTVIHPS ALMADGLSSL LLILGPQRGW DYAQEHKIPA
FFVIRADKRF IIRSNASFDH LVVQQPR
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