| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1899 |
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| Symbol | |
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| ID | 3367409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2173554 |
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| End bp | 2174846 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652245 |
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| Product | major facilitator transporter |
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| Protein accession | YP_234981 |
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| Protein GI | 66045140 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00967745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.065462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCA CAACAAGTAA GGGCAAAGCG ATCTTTCGCG TTGTCAGCGG TAACTTCCTC
GAGATGTTCG ATTTCATGGT CTACGGCTTC TATGCCACGG CCATCGCAAA AACCTTCTTC
CCTTCCGACA GCGCTTTCGC TTCGTTGATG CTGTCGCTGG CGACCTTCGG CGCAGGCTTC
CTGATGCGTC CGCTGGGCGC AATCTTTCTC GGTGCCTACA TCGACCGTCA CGGGCGTCGC
AAAGGGCTGA TTATCACCCT CGCGATGATG GCAATGGGCA CTCTGTTGAT TGCCTGCGTG
CCGGGCTACT CCACATTGGG CGTCATCGCC CCCTTGCTGG TGCTGCTCGG TCGTTTGCTG
CAAGGTTTCT CGGCAGGTGT GGAACTGGGT GGTGTTTCGG TGTACCTGGC TGAAATCTCG
ACACCGGGCC GCAAAGGCTT CTTCGTCAGC TGGCAGTCCG CCAGCCAACA GGCCGCCGTG
GTCTTCGCCG GCTTGCTGGG CGTGGGTCTC AACCACTGGC TGAGCCCGGA GCAGATGGGT
GAATGGGGCT GGCGCGTGCC GTTCCTGATC GGCTGCCTGA TCGTGCCGGC CATCTTCATC
ATCCGTCGCT CGCTGGAAGA GTCGCCGGAG TTCGAAGCCC GCACGCATCG CCCGACGCTG
AGTGAAGTGG TGCGGTCTAT CGGCCAGAAC TTCGGTCTGG TGCTGGGCGG CATGGCGCTG
GTGGTCATGA CCACCGTGAC GTTCTACCTG ATCACCGCTT ACACCCCGAC CTTCGGCAAG
AACGAGTTGA ACCTGACAGA CCTGGAAAGC CTGCTGGTGA CGGTCTGCGT TGGTGTGTCC
AACTTCATCT GGCTGCCGAT CATGGGCTCG TTCTCGGACC GCATCGGCCG CAAGCCGCTG
CTGATTGCGG CGACCGTACT GGCAATCGCC ACTGCCTACC CTGCTCTTTC GTGGCTGGTT
GCGCACCCGA GCTTCGGCAA CCTGCTGATG GTCGAGTTGT GGCTGTCGTT CCTGTATGGC
TCCTACAACG GGGCAATGGT CGTGGCGCTG ACCGAGATCA TGCCGGTCGA CGTCCGCACC
ACCGGCTTCT CGCTGGCCTA CAGCCTGGCG ACTGCGACCT TCGGTGGTTT TACCCCGGCG
GCCTGTACTT ACCTGATTCA CGTACTGGAC AACAAGGCAG CGCCAGGTAT CTGGCTAACC
GGCGCAGCGG TGCTGGGTCT GGTTGCGACG CTGATACTGT TCCGCAAGGG TGGGCAGAAG
CTTGAAGCGC CTGTCGCGGC TTCCGCCAGC TGA
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| Protein sequence | MASTTSKGKA IFRVVSGNFL EMFDFMVYGF YATAIAKTFF PSDSAFASLM LSLATFGAGF
LMRPLGAIFL GAYIDRHGRR KGLIITLAMM AMGTLLIACV PGYSTLGVIA PLLVLLGRLL
QGFSAGVELG GVSVYLAEIS TPGRKGFFVS WQSASQQAAV VFAGLLGVGL NHWLSPEQMG
EWGWRVPFLI GCLIVPAIFI IRRSLEESPE FEARTHRPTL SEVVRSIGQN FGLVLGGMAL
VVMTTVTFYL ITAYTPTFGK NELNLTDLES LLVTVCVGVS NFIWLPIMGS FSDRIGRKPL
LIAATVLAIA TAYPALSWLV AHPSFGNLLM VELWLSFLYG SYNGAMVVAL TEIMPVDVRT
TGFSLAYSLA TATFGGFTPA ACTYLIHVLD NKAAPGIWLT GAAVLGLVAT LILFRKGGQK
LEAPVAASAS
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