Gene Psyr_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1874 
Symbol 
ID3367383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2149275 
End bp2150246 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content58% 
IMG OID637652222 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_234959 
Protein GI66045118 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGAG TTGTTGCAGC AGCGGTGTAC AGCAAGGGCA AAAAAGTCCG TGATATCACC 
CTTGATGAGG GCGCCGCCTG GGCGGCCAAG CCCGATCATT TCGTCTGGAT AGGACTGGAG
CAGCCCACCA ACGCGGAGCT GACCAGCCTC AAGGATCAGT TCAATCTGCA TGAGCTGGCC
CTTGAAGACG CGCTGGAGGT GCATAGCCGT CCGAAGCTGG AAACCTTCGG TGATGCGCTG
TTCATCGTGA CTTACGCCCC CGTACGCGAC AACGGCAAGC TGCTGTTCAT CGAAACCCAT
ATCTTCGCCG GCAAGGGCTA TATCATCACC TCGCGCAACG GCCACTCCAA GTCCTACGGA
CTGGTGCGTC AGCGCTGCGA GGCCAGACCA CTGCTATTGG AACACGGCGA AGACTTTGTG
CTCTACGCGC TTCTGGACTT CGTGACCGAG AACTATCAGC CGGTGACCGA AGCCATCCAC
GCCGAGCTCG AGCAACTGGA GCAGAGCGTC ATTGGTGGTT CGTTGCGCGA GTCCGACATC
CAGCACATTC ATGCCCTGCG CCGCGACCTG TTACGCATGC GCCGCTACGT GGCACCGATG
GTGGAAGTGG GCGAAGAATT GCAGAGACTC AGTTTTCCGT TCATCGACAA GAACATGCGC
CCCTACTTTC GCGATGTCGA AATTCACGTC AAGCGGCAGA TGGAAGACCT CGGCAATCTG
TGTGACATCG CCAGCCAGAC GATCGAAATC GGCCTGCTGC TGGAGTCTTC GCGACAAAGC
ATCGTGCAGC GCAAGTTTGC CGGTTGGGCG GCGATTCTGG CGTTCCCGAC GGCCATTGCC
GGCATCTACG GCATGAATTT CGAGAACATG CCTGAACTCA AGTGGGAACA CGGCTACTTC
ATCGTGCTGG GTGTCATTCT GGGCGGGTGT ACGGCGCTGT TCGCCAGCTT CAAGCGCTCC
GGCTGGCTAT AA
 
Protein sequence
MGRVVAAAVY SKGKKVRDIT LDEGAAWAAK PDHFVWIGLE QPTNAELTSL KDQFNLHELA 
LEDALEVHSR PKLETFGDAL FIVTYAPVRD NGKLLFIETH IFAGKGYIIT SRNGHSKSYG
LVRQRCEARP LLLEHGEDFV LYALLDFVTE NYQPVTEAIH AELEQLEQSV IGGSLRESDI
QHIHALRRDL LRMRRYVAPM VEVGEELQRL SFPFIDKNMR PYFRDVEIHV KRQMEDLGNL
CDIASQTIEI GLLLESSRQS IVQRKFAGWA AILAFPTAIA GIYGMNFENM PELKWEHGYF
IVLGVILGGC TALFASFKRS GWL