Gene Psyr_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1869 
Symbol 
ID3367378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2144238 
End bp2145647 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content60% 
IMG OID637652217 
Producthypothetical protein 
Protein accessionYP_234954 
Protein GI66045113 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.242518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.620007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA CCTTTTATGA CGAGATGTAC GATGCGGGCG GCGTAGTCCG TCCGCACTAT 
CGGGAGTTCG CCCGCTGGCT GGGTGATACA CCTCCCGAGC TTTTGGCTCA ACGCAGGCGC
GAAGCTGATC TGCTGTTTCA CCGTGCCGGG ATCACGTTCA CACTCTATGG TGATGAGCAG
GGCACCGAGC GGCTTATCCC TTTCGATACC ATCCCGCGCA GCATCCCGGC CAGCGAATGG
CGGGTTGTCG AGCGTGGCTG CATTCAGCGC GTCAAGGCGC TGAACATGTT TCTGGCGGAT
CTGTATCACG ACCAGCGGAT TATCAAGGCC GGGATAATTC CCGCCGAACA GGTGCTGGCC
AACGAGCAGT ATCAGCTGGC AATGCAGGGC CTGAACCTGC ACCGCGATCT GTACTCGCAT
ATTTCCGGCG TCGATCTGGT GCGCGACGGT GACGGCACCT ATTACGTGCT GGAAGACAAC
CTGCGCACCC CGAGCGGCGT GAGCTACATG CTCGAAGACC GCAAGATGAT GATGCGCCTG
TTCCCGGAGC TGTTTTCCGC GCAGCGCATT GCGCCGATCG ACCACTACCC GAACCTGTTG
CTCGACACGC TCAAGAGTTC CAGCCATCTG GACAACCCGA GTGTCGTGGT GCTGACGCCT
GGCCGCTTCA ACAGCGCTTT TTTCGAGCAT GCATTTCTGG CTCGCGAGAT GGGCGTCGAA
CTGGTGGAAG GTGCTGATCT GTTTGTCCGC GATGACCGCG TGTTCATGCG CACCACTGAT
GGCCCGAAAG CCGTTGACGT GATCTATCGT CGTCTCGATG ACGCATTTCT CGATCCGCTG
GCCTTCAACC CTGACTCGAT GCTGGGCGTC CCGGGGCTGC TGTCTGCCTA TCGATCCGGC
AACGTGGTGC TGGCCAATGC GATTGGTACC GGCGTTGCGG ATGACAAGTC GGTTTATCCC
TACGTCACCG ATATGATTCG CTTCTATCTG GACGAAGAGC CGATTCTCAA GAACGTGCCG
ACCTGGCAGT GCCGCAAGCC CGAAGAGCTG TCGCATGTGC TGGCCAACCT GGGCGACCTG
GTCGTCAAGG AAACCCAGGG CTCCGGCGGC TACGGCATGC TGGTCGGCCC CGCAGCGACC
GCCGCCGAGA TCGAAGCCTT CCGGGCGCGC CTCAAGGCCA AGCCGCATGC GTACATCGCA
CAACCCACCT TGTGCCTGTC GACCTGTCCG ACCTTTGTCG AGAACGGCAT CGCCCCGCGA
CATATCGATT TGCGCCCGTT TGTTCTGTCC GGTCGTGAAA CCCGCGTTGT GCCTGGCGGG
CTTACCCGAG TGGCCTTGCG TGAAGGCTCA CTGGTGGTCA ATTCGTCACA GGGTGGCGGA
ACCAAAGACA CCTGGGTGGT CGAGGATTAA
 
Protein sequence
MIRTFYDEMY DAGGVVRPHY REFARWLGDT PPELLAQRRR EADLLFHRAG ITFTLYGDEQ 
GTERLIPFDT IPRSIPASEW RVVERGCIQR VKALNMFLAD LYHDQRIIKA GIIPAEQVLA
NEQYQLAMQG LNLHRDLYSH ISGVDLVRDG DGTYYVLEDN LRTPSGVSYM LEDRKMMMRL
FPELFSAQRI APIDHYPNLL LDTLKSSSHL DNPSVVVLTP GRFNSAFFEH AFLAREMGVE
LVEGADLFVR DDRVFMRTTD GPKAVDVIYR RLDDAFLDPL AFNPDSMLGV PGLLSAYRSG
NVVLANAIGT GVADDKSVYP YVTDMIRFYL DEEPILKNVP TWQCRKPEEL SHVLANLGDL
VVKETQGSGG YGMLVGPAAT AAEIEAFRAR LKAKPHAYIA QPTLCLSTCP TFVENGIAPR
HIDLRPFVLS GRETRVVPGG LTRVALREGS LVVNSSQGGG TKDTWVVED