Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1869 |
Symbol | |
ID | 3367378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2144238 |
End bp | 2145647 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652217 |
Product | hypothetical protein |
Protein accession | YP_234954 |
Protein GI | 66045113 |
COG category | [S] Function unknown |
COG ID | [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.242518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.620007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA CCTTTTATGA CGAGATGTAC GATGCGGGCG GCGTAGTCCG TCCGCACTAT CGGGAGTTCG CCCGCTGGCT GGGTGATACA CCTCCCGAGC TTTTGGCTCA ACGCAGGCGC GAAGCTGATC TGCTGTTTCA CCGTGCCGGG ATCACGTTCA CACTCTATGG TGATGAGCAG GGCACCGAGC GGCTTATCCC TTTCGATACC ATCCCGCGCA GCATCCCGGC CAGCGAATGG CGGGTTGTCG AGCGTGGCTG CATTCAGCGC GTCAAGGCGC TGAACATGTT TCTGGCGGAT CTGTATCACG ACCAGCGGAT TATCAAGGCC GGGATAATTC CCGCCGAACA GGTGCTGGCC AACGAGCAGT ATCAGCTGGC AATGCAGGGC CTGAACCTGC ACCGCGATCT GTACTCGCAT ATTTCCGGCG TCGATCTGGT GCGCGACGGT GACGGCACCT ATTACGTGCT GGAAGACAAC CTGCGCACCC CGAGCGGCGT GAGCTACATG CTCGAAGACC GCAAGATGAT GATGCGCCTG TTCCCGGAGC TGTTTTCCGC GCAGCGCATT GCGCCGATCG ACCACTACCC GAACCTGTTG CTCGACACGC TCAAGAGTTC CAGCCATCTG GACAACCCGA GTGTCGTGGT GCTGACGCCT GGCCGCTTCA ACAGCGCTTT TTTCGAGCAT GCATTTCTGG CTCGCGAGAT GGGCGTCGAA CTGGTGGAAG GTGCTGATCT GTTTGTCCGC GATGACCGCG TGTTCATGCG CACCACTGAT GGCCCGAAAG CCGTTGACGT GATCTATCGT CGTCTCGATG ACGCATTTCT CGATCCGCTG GCCTTCAACC CTGACTCGAT GCTGGGCGTC CCGGGGCTGC TGTCTGCCTA TCGATCCGGC AACGTGGTGC TGGCCAATGC GATTGGTACC GGCGTTGCGG ATGACAAGTC GGTTTATCCC TACGTCACCG ATATGATTCG CTTCTATCTG GACGAAGAGC CGATTCTCAA GAACGTGCCG ACCTGGCAGT GCCGCAAGCC CGAAGAGCTG TCGCATGTGC TGGCCAACCT GGGCGACCTG GTCGTCAAGG AAACCCAGGG CTCCGGCGGC TACGGCATGC TGGTCGGCCC CGCAGCGACC GCCGCCGAGA TCGAAGCCTT CCGGGCGCGC CTCAAGGCCA AGCCGCATGC GTACATCGCA CAACCCACCT TGTGCCTGTC GACCTGTCCG ACCTTTGTCG AGAACGGCAT CGCCCCGCGA CATATCGATT TGCGCCCGTT TGTTCTGTCC GGTCGTGAAA CCCGCGTTGT GCCTGGCGGG CTTACCCGAG TGGCCTTGCG TGAAGGCTCA CTGGTGGTCA ATTCGTCACA GGGTGGCGGA ACCAAAGACA CCTGGGTGGT CGAGGATTAA
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Protein sequence | MIRTFYDEMY DAGGVVRPHY REFARWLGDT PPELLAQRRR EADLLFHRAG ITFTLYGDEQ GTERLIPFDT IPRSIPASEW RVVERGCIQR VKALNMFLAD LYHDQRIIKA GIIPAEQVLA NEQYQLAMQG LNLHRDLYSH ISGVDLVRDG DGTYYVLEDN LRTPSGVSYM LEDRKMMMRL FPELFSAQRI APIDHYPNLL LDTLKSSSHL DNPSVVVLTP GRFNSAFFEH AFLAREMGVE LVEGADLFVR DDRVFMRTTD GPKAVDVIYR RLDDAFLDPL AFNPDSMLGV PGLLSAYRSG NVVLANAIGT GVADDKSVYP YVTDMIRFYL DEEPILKNVP TWQCRKPEEL SHVLANLGDL VVKETQGSGG YGMLVGPAAT AAEIEAFRAR LKAKPHAYIA QPTLCLSTCP TFVENGIAPR HIDLRPFVLS GRETRVVPGG LTRVALREGS LVVNSSQGGG TKDTWVVED
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