| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1864 |
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| Symbol | |
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| ID | 3367373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2139549 |
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| End bp | 2140409 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637652212 |
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| Product | spermidine synthase |
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| Protein accession | YP_234949 |
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| Protein GI | 66045108 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0174037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT ATCAGGAAAC GTTATACGAA GGCTACGGCC AACGCTTTCG TATGGAAAAA
ATGCTTCACG AAGTACGTAC CGATCACCAG CACCTGGTGA TCTTCCAGAA CCCGCGCATG
GGCCGTGTCA TGGCGCTGGA CGGCGTCATT CAGACCACCG AAGCGGACGA ATTCATCTAC
CACGAAATGC TCACCCATGT GCCGATTCTG GCGCACGGTG CAGCCAAGCG CGTACTGATC
ATCGGCGGTG GCGACGGCGG CATGCTGCGT GAAGTCGCCA AGCACATGAG CGTCGAACAT
ATCACCATGG TCGAGATCGA TGCGACCGTG GTCGAGATGT GCAAGGAATA TCTGCCCAAT
CATTCCAGCG GTGCCTTCGA CGATTCGCGT CTGAACCTGG TGATCGACGA CGGCATGCGC
TTCGTCGCGA CCACCGAAGA GAAGTTCGAC GTGATCATCT CCGACTCCAC CGATCCGATC
GGCCCGGGTG AAGTCCTGTT CTCGGAAAAC TTTTATCAGG CCTGCCATCG CTGCCTCAAT
GAAGGCGGCA TTCTGGTCAC CCAGAACGGC ACGCCTTTCA TGCAGTTGAG CGGTGTGCAG
ACCACGGCCG GGCGCATGAA CGGTCTGTTT GCCGACTGGC ATTTCTATCA CGCAGCGATC
CCGACCTACA TTGGCGGCGC AATGACTTTC GCCTGGGGTT CGACCGACAA GAGCTATCGC
AAACTGCCGC TGGAAACCCT GCGTCAGCGT TTCTCGGGCA GCGGTATTGT TACGCGTTAT
TACAATCCGG AAGTCCACAT CGGCGCATTC GCCTTGCCAC AGTACGTTCT GCAGGCCGTA
GGCAAGGCCA GCAACGACTG A
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| Protein sequence | MSDYQETLYE GYGQRFRMEK MLHEVRTDHQ HLVIFQNPRM GRVMALDGVI QTTEADEFIY
HEMLTHVPIL AHGAAKRVLI IGGGDGGMLR EVAKHMSVEH ITMVEIDATV VEMCKEYLPN
HSSGAFDDSR LNLVIDDGMR FVATTEEKFD VIISDSTDPI GPGEVLFSEN FYQACHRCLN
EGGILVTQNG TPFMQLSGVQ TTAGRMNGLF ADWHFYHAAI PTYIGGAMTF AWGSTDKSYR
KLPLETLRQR FSGSGIVTRY YNPEVHIGAF ALPQYVLQAV GKASND
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