Gene Psyr_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1862 
Symbol 
ID3367371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2138075 
End bp2139001 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID637652210 
ProductZinc transporter ZIP 
Protein accessionYP_234947 
Protein GI66045106 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.697173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACGC CCGCATCATC CCGAACGCCC TGGGCGGCCT GGTTAAACCA GCTTCAGGGC 
AGCCCGCTGG TAAGCCTGGG CTTCGCCCTC GCCCTGCTGA TCGTCGTCGC CCTCGGTGGC
ATCAGCCTTT ACAACGCCTT CTATGGCACC AGTCAGGTCA ACTTCAATCA CGCCCTGCTG
GGCGGTATCG CGGGTTTTCT GGCGACGGCG CTAGGCGCAG TGATGGCGGT TGCCCTGCGC
AACGTCTCGC AACGCGCTCA GGACATCATG CTCGGGTTCG CTGCGGGGAT GATGCTGGCG
GCCAGTTCGT TCTCGCTGAT TCTTCCAGGC CTGGAAGCCG CCCGGGACAT TACCGACAGC
GGGCCGTGGG CAGCTGCGAC GGTTGTCGCC GGCCTGGGGC TGGGGGTGCT GCTGATGCTG
GGGCTGGACC GGTTCACCCC GCACGAACAT GAAAGCGTAG GCCGCCAGGG GCCTCATTCG
GATCGAATCA GTCGGGTCTG GCTGTTCGTG CTGGCGATCA CCCTGCATAA CCTGCCCGAG
GGCATGGCGA TTGGCGTCAG TTTCGCCAGC GGCGACATGA ACGTCGGCCT GCCATTGACC
ACGGCCATCG CCATTCAGGA CATTCCCGAA GGTCTGGCCA TTGCGCTGGC CCTGCGTGCG
ACCGGCCTGT CGGCCTTCAA GGCGATGCTG GTGGCCATCG GTTCCGGCCT CATGGAGCCG
CTGGGCTCAC TGGTGGGCCT GGGCATCTCC AGCGGCTTTG CCATCGCCTA CCCCTTGAGC
ATGGGGCTGG CGGCAGGCGC GATGATCTTC GTGGTCTCTC ATGAAGTCAT CCCGGAAACC
CACCGCAATG GCCATCAGAC CTCGGCAACC CTGGGCCTGA TGGGCGGCTT TGCGGTGATG
ATGTTTCTCG ATACGGCGCT GGGTTAA
 
Protein sequence
MPTPASSRTP WAAWLNQLQG SPLVSLGFAL ALLIVVALGG ISLYNAFYGT SQVNFNHALL 
GGIAGFLATA LGAVMAVALR NVSQRAQDIM LGFAAGMMLA ASSFSLILPG LEAARDITDS
GPWAAATVVA GLGLGVLLML GLDRFTPHEH ESVGRQGPHS DRISRVWLFV LAITLHNLPE
GMAIGVSFAS GDMNVGLPLT TAIAIQDIPE GLAIALALRA TGLSAFKAML VAIGSGLMEP
LGSLVGLGIS SGFAIAYPLS MGLAAGAMIF VVSHEVIPET HRNGHQTSAT LGLMGGFAVM
MFLDTALG