Gene Psyr_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1853 
Symbol 
ID3367362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2130979 
End bp2132070 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID637652201 
Productchorismate synthase 
Protein accessionYP_234938 
Protein GI66045097 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA ACACTTTCGG CAAGCTGTTC ACTGTCACCA CCGCCGGCGA AAGCCACGGC 
CCGGCGCTGG TCGCTATCGT CGACGGCTGC CCGCCGGGGC TGGAGCTGGA CCTGCAAGAC
CTGCAGCGCG ACCTGGACCG GCGCAAGCCG GGCACCAGCC GCCATACCAC GCAGCGTCAG
GAAGCCGATG AGGTCGAGAT ACTCTCGGGT GTCTTCGAGG GCAAGACCAC CGGCGCGTCC
ATAGGCCTGC TGATCCGCAA CACCGATCAG AAATCCAAGG ACTATTCGGC GATCAAGGAC
CTGTTCCGCC CGGCCCACGC CGATTACACC TATCACCACA AGTACGGCAT CCGCGACTAC
CGCGGTGGCG GACGCAGTTC GGCAAGGGAA ACCGCCATGC GTGTGGCTGC GGGGGCCATC
GCCAAGAAGT ATCTGGCAAG CCAGGGCATC GTCATTCGCG GCTACATGAG CCAGCTGGGC
CCGATCCAGA TCCCGTTCAA GACCTGGGAT TCGGTAGAAG ACAACGCGTT TTTCTGCCCC
GACCCTGACA AGGTGCCGGA ACTGGAAGCC TACATGGACC AGCTGCGACG TGATCAGGAC
TCGGTCGGTG CGAAAATCAC CGTGGTCGCA GACGGGGTAA TGCCGGGTCT CGGCGAGCCG
ATCTTCGATC GTCTGGACGC TGAGCTCGCG CACGCGCTGA TGAGCATCAA CGCGGTCAAG
GGTGTGGAAA TCGGTGCCGG TTTCGACTGT GTTGCCCAGC GCGGCACCGA GCACCGCGAC
GAGATGACGC CACAGGGTTT CCTGTCCAAT CACGCGGGCG GCATTCTCGG CGGCATTTCC
TCCGGCCAGC CGATCATCGC GCATCTGGCG CTCAAGCCGA CCTCCAGCAT CACCACGCCA
GGGCGTTCGA TCGATGTCGA TGGCAACGCC GCCGATGTCA TCACCAAAGG TCGGCATGAC
CCGTGTGTCG GCATCCGTGC CACACCGATT GCCGAGGCAA TGATGGCCAT CGTTCTGCTC
GATCACCTGC TGCGCCATCG CGGTCAGAAC GCCGACGTCA GCGTCAACAC ACCTGTGCTG
GGGCAGGTGT AA
 
Protein sequence
MSGNTFGKLF TVTTAGESHG PALVAIVDGC PPGLELDLQD LQRDLDRRKP GTSRHTTQRQ 
EADEVEILSG VFEGKTTGAS IGLLIRNTDQ KSKDYSAIKD LFRPAHADYT YHHKYGIRDY
RGGGRSSARE TAMRVAAGAI AKKYLASQGI VIRGYMSQLG PIQIPFKTWD SVEDNAFFCP
DPDKVPELEA YMDQLRRDQD SVGAKITVVA DGVMPGLGEP IFDRLDAELA HALMSINAVK
GVEIGAGFDC VAQRGTEHRD EMTPQGFLSN HAGGILGGIS SGQPIIAHLA LKPTSSITTP
GRSIDVDGNA ADVITKGRHD PCVGIRATPI AEAMMAIVLL DHLLRHRGQN ADVSVNTPVL
GQV