Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1853 |
Symbol | |
ID | 3367362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2130979 |
End bp | 2132070 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652201 |
Product | chorismate synthase |
Protein accession | YP_234938 |
Protein GI | 66045097 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCA ACACTTTCGG CAAGCTGTTC ACTGTCACCA CCGCCGGCGA AAGCCACGGC CCGGCGCTGG TCGCTATCGT CGACGGCTGC CCGCCGGGGC TGGAGCTGGA CCTGCAAGAC CTGCAGCGCG ACCTGGACCG GCGCAAGCCG GGCACCAGCC GCCATACCAC GCAGCGTCAG GAAGCCGATG AGGTCGAGAT ACTCTCGGGT GTCTTCGAGG GCAAGACCAC CGGCGCGTCC ATAGGCCTGC TGATCCGCAA CACCGATCAG AAATCCAAGG ACTATTCGGC GATCAAGGAC CTGTTCCGCC CGGCCCACGC CGATTACACC TATCACCACA AGTACGGCAT CCGCGACTAC CGCGGTGGCG GACGCAGTTC GGCAAGGGAA ACCGCCATGC GTGTGGCTGC GGGGGCCATC GCCAAGAAGT ATCTGGCAAG CCAGGGCATC GTCATTCGCG GCTACATGAG CCAGCTGGGC CCGATCCAGA TCCCGTTCAA GACCTGGGAT TCGGTAGAAG ACAACGCGTT TTTCTGCCCC GACCCTGACA AGGTGCCGGA ACTGGAAGCC TACATGGACC AGCTGCGACG TGATCAGGAC TCGGTCGGTG CGAAAATCAC CGTGGTCGCA GACGGGGTAA TGCCGGGTCT CGGCGAGCCG ATCTTCGATC GTCTGGACGC TGAGCTCGCG CACGCGCTGA TGAGCATCAA CGCGGTCAAG GGTGTGGAAA TCGGTGCCGG TTTCGACTGT GTTGCCCAGC GCGGCACCGA GCACCGCGAC GAGATGACGC CACAGGGTTT CCTGTCCAAT CACGCGGGCG GCATTCTCGG CGGCATTTCC TCCGGCCAGC CGATCATCGC GCATCTGGCG CTCAAGCCGA CCTCCAGCAT CACCACGCCA GGGCGTTCGA TCGATGTCGA TGGCAACGCC GCCGATGTCA TCACCAAAGG TCGGCATGAC CCGTGTGTCG GCATCCGTGC CACACCGATT GCCGAGGCAA TGATGGCCAT CGTTCTGCTC GATCACCTGC TGCGCCATCG CGGTCAGAAC GCCGACGTCA GCGTCAACAC ACCTGTGCTG GGGCAGGTGT AA
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Protein sequence | MSGNTFGKLF TVTTAGESHG PALVAIVDGC PPGLELDLQD LQRDLDRRKP GTSRHTTQRQ EADEVEILSG VFEGKTTGAS IGLLIRNTDQ KSKDYSAIKD LFRPAHADYT YHHKYGIRDY RGGGRSSARE TAMRVAAGAI AKKYLASQGI VIRGYMSQLG PIQIPFKTWD SVEDNAFFCP DPDKVPELEA YMDQLRRDQD SVGAKITVVA DGVMPGLGEP IFDRLDAELA HALMSINAVK GVEIGAGFDC VAQRGTEHRD EMTPQGFLSN HAGGILGGIS SGQPIIAHLA LKPTSSITTP GRSIDVDGNA ADVITKGRHD PCVGIRATPI AEAMMAIVLL DHLLRHRGQN ADVSVNTPVL GQV
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