| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1852 |
|---|
| Symbol | |
|---|
| ID | 3367361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2129806 |
|---|
| End bp | 2130837 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637652200 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234937 |
|---|
| Protein GI | 66045096 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.613868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCCG GTATTTCCCT GCTTCGAGTT CCCAACGCGC TGCGTCTGCT GGCCCTGCCG
ATAACCCTGA TCCTGAGCCT GGCCGCCGCA ACCGCCAGCG CTGCGGCGCC CGGTACGGTG
CAGCGGCCGA TAAGCGTGGA TACCGAGAAC GGCAAGCTGT ACGGCACGCT GCTCATGCCG
CGTTCCGACA AACCGGTGCC GGTGGTGCTG ATCGTCGCCG GTTCCGGCCC CACCGACCGC
GACGGCAACA ACCCGGAGGG TGGACGCAAC GACAGCATGA AACGCCTGGC GGTGATCCTG
GCCAGCAACA ATATCGCCAG CGTGCGCTAC GACAAACGCG GCGTCGCGGC CAGCAAGGCG
GTCACGCCGG ATGAACGCAA CCTGAGCGTC GAGCGCTATG TGGCCGATGT GCAGCTCTGG
GCCAGAGCGC TGAAAGCCAA CCCGCGCCTG GGCCAGTTGA TTCTGTTGGG CCACAGCGAA
GGCGCGCTGG TGGCGACGCT GGCGGCTGAA AAAGTAGGAG CAGCGGCGCT GATTTCCGTG
GCCGGCACCG GGCGACCGGT GGATCAGGTG CTGCGCGAAC AGTTTCAGGA GCGCCTGCCA
CCGGACCTGC TGCAGCGCAG CGATCAGTTG CTCGACGAAC TCAAGGCCGG CAAGACCGAT
GACAACGTGC CCGCCGAGCT GGAAGTGGTG TTCCGCCCCA GTGTCCAGCC GTACCTGATC
TCGCTGTTCC GCCAGGACCC GGCGGCGGCT TTCGGTGCCT TGCACATTCC GGCGCTGATC
GTTCAGGGTC GCAACGACAT TCAGGTCGGT GTGGGTGATG CGCTGCTGTT GCAGAAGGCC
AAGCCGGATG CACAGCTGGC CCTGATCGAC GGCATGAATC ATGTGCTGCG CATCGTCCCG
GACGATTTGC AGCAACAACT GCTCTCCTAC CGCAATCCGA CCCAGCCGCT GGCCAGTGAA
GTGACCGAGC GGATCCTGAG CTTCATCAAG GCGCTGCCTC ACCCGGATGC CACACCCGGG
AAAAAGATCT GA
|
|---|
| Protein sequence | MLSGISLLRV PNALRLLALP ITLILSLAAA TASAAAPGTV QRPISVDTEN GKLYGTLLMP
RSDKPVPVVL IVAGSGPTDR DGNNPEGGRN DSMKRLAVIL ASNNIASVRY DKRGVAASKA
VTPDERNLSV ERYVADVQLW ARALKANPRL GQLILLGHSE GALVATLAAE KVGAAALISV
AGTGRPVDQV LREQFQERLP PDLLQRSDQL LDELKAGKTD DNVPAELEVV FRPSVQPYLI
SLFRQDPAAA FGALHIPALI VQGRNDIQVG VGDALLLQKA KPDAQLALID GMNHVLRIVP
DDLQQQLLSY RNPTQPLASE VTERILSFIK ALPHPDATPG KKI
|
|---|
| |