Gene Psyr_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1850 
Symbol 
ID3367359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2127861 
End bp2128769 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID637652198 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_234935 
Protein GI66045094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.966602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.416711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTT CCCGTCTGCG TACCGTGCGC GACCATATAC GCTGGGCCGT CAGCCGCTTT 
CACGAGGAAG ACGTATTTTT CGGTCATGGC ACCGACAATG CCTGGGATGA AGCACGGCAA
CTGGTGCTGG GCGCACTGCA CCTGCCTTGG GAAATTGCCG ACAGCTACCT GGATTGCCGT
CTGGAAGTCG ATGAAATATC CGAACTGCAA CGCTTGATCA AGCGTCGCAT CGATGAGCGT
GTGCCAACTC CTTATCTGCT GGGCGAGGCC TGGTTCTGTG GCATGTCGTT CATTGTCGAT
GACCGCGTCT TGATCCCGCG TTCGCCCATC GCCGAGCTGA TCGAAGAGCG TTTCGCCCCC
TGGCTGGCCG ACGAGCCGGC GCGGATTCTC GACCTGTGCA CAGGCTCCGG TTGCATCGGT
ATCGCCTGCG CCGAGGTGTT TCCCGAAGCC GAGGTGGCCC TGGCCGACCT GTCCTACGAC
GCACTGGAAG TGGCCAATCA GAACATCGAA CGTCACGGCA TGGAGGATCG CGTCTACACC
GTTCAGGGCG ACGGATTCGA CGGCCTGCCG GGTCAGCGCT TCGACCTGAT CGTGTCCAAC
CCGCCCTATG TGGACGCCGA AGACTTTGCC GATATGCCCG ACGAGTATCA GCATGAGCCG
GAGCTGGCGC TGGCCTGTGG CAGCGACGGT CTGAACCTGG TCCGCCGCAT GCTCGCCCAG
GCCGCCGATC ATCTGAACGA GAAGGGCCTG TTGATCGTCG AGGTCGGCAA TAGCCAGGTG
CACGTGCAGG CGCTGTACCC GGAGGTCGAT TTCGCCTGGC TGGACTTCCA GCGCGGCGGG
CATGGTGTGT TCATGCTCAC GGCAGAACAG TGCCGCGACC ATCAGGCACT GTTCCAGTCG
AAGGTTTGA
 
Protein sequence
MITSRLRTVR DHIRWAVSRF HEEDVFFGHG TDNAWDEARQ LVLGALHLPW EIADSYLDCR 
LEVDEISELQ RLIKRRIDER VPTPYLLGEA WFCGMSFIVD DRVLIPRSPI AELIEERFAP
WLADEPARIL DLCTGSGCIG IACAEVFPEA EVALADLSYD ALEVANQNIE RHGMEDRVYT
VQGDGFDGLP GQRFDLIVSN PPYVDAEDFA DMPDEYQHEP ELALACGSDG LNLVRRMLAQ
AADHLNEKGL LIVEVGNSQV HVQALYPEVD FAWLDFQRGG HGVFMLTAEQ CRDHQALFQS
KV