Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1835 |
Symbol | |
ID | 3367344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2114781 |
End bp | 2116145 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652183 |
Product | amino acid permease-associated region |
Protein accession | YP_234920 |
Protein GI | 66045079 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | [TIGR00908] ethanolamine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.355552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.288661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAC AACTCAAGCC GACGCTCGGC ACGATTCATT TATGGGGGAT CGCGGTAGGG CTGGTGATTT CCGGCGAATA CTTCGGCTGG AGCTACGGCT GGGGCGTTGC GGGTACGCTG GGCTTTTTGG TAACAGCCCT GATGGTTGCC ACCATGTACA CCTGTTTCAT TTTCAGTTTT ACCGAGCTCA CCACCGCCAT CCCGCACGCC GGCGGTCCGT TCGCCTACAG CCGTCGTGCC TTTGGCGAAA AAGGCGGACT GATCGCAGGC ATGGCCACCC TGATCGAGTT CGTCTTTGCG CCACCGGCCA TTGCCATGGC GATCGGTGCG TACCTTAATG TGCAATACCC GGGGCTGGAC CCCAAGCATG CGGCAGTCGG CGCCTACATC GTCTTCATGG CGCTCAACAT CGTGGGCGTG AAGCTCGCCG CAACCTTCGA GCTGGTGGTG TGCATTCTGG CCGTCGCCGA GTTGCTGGTG TTCATGGGCG TCGTCGCGCC TGCCTTCAGT TTCAGCAACT TCGCCCTCAA CGGCTGGGCC GGTTCGCAGA CCTTCGGACC CGAAGCCATT GCCGGCATGT TCGCTGCCAT CCCCTTCGCC ATCTGGTTCT TCCTGGCCAT CGAAGGCGCT GCAATGGCCG CCGAAGAAGC CAAGGACCCG AAACGCACCA TCCCGAAGGC CTACATCAGT GGCATTCTGA CCTTGGTGAT ACTGGCGATC GGCGTCATGC TGTTTGCCGG TGGCGTGGGC GACTGGCGCA CCCTGGCCAA CATCAACGAT CCGCTGCCGC AGGCCATGAA AGCCGTGGTC GGTGACAGTT CCGGCTGGCT GCACATGCTG GTGTGGATCG GCCTGTTCGG TCTGGTCGCC AGCTTCCACG GGATCATCAT GGGTTACTCG CGCCAGTTCT TCGCCCTCGC CCGCGCCGGC TACCTGCCCG CCTCGCTGGC CAGGCTTTCG CGCTTCCAGA CGCCGCACCG GGCAATCATC GCCGGCGGTC TGATCGGCAT CGCCGCGATC TACAGCGACG GCCTGATCAA CCTGAGTGGC ATGACGCTGA CCGCTGCGAT GATCACCATG GCCGTGTTCG GCGCCATCGT CATGTACATC ATGAGCATGC TCAGCCTGTT CAAACTGCGC AAGACCGAGC CTGGCCTGGA GCGCACGTTC CGCGCCCCCG GTTATCCGGT AGTGCCCGGC ATCGCCCTGG CGCTGGCCGT CGTGTGTCTG GTGGCAATGG CCTGGTTCAA CGCATTGATC GGCCTGATTT TCCTCGGCCT GATGGCCGTC GGCTTCATCT ACTTCAGCCT GACCGCCAAA TTGCGTGCCG ACGCGCCGAC CGACGCGATG CTGACCGGGG AGTAA
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Protein sequence | MSTQLKPTLG TIHLWGIAVG LVISGEYFGW SYGWGVAGTL GFLVTALMVA TMYTCFIFSF TELTTAIPHA GGPFAYSRRA FGEKGGLIAG MATLIEFVFA PPAIAMAIGA YLNVQYPGLD PKHAAVGAYI VFMALNIVGV KLAATFELVV CILAVAELLV FMGVVAPAFS FSNFALNGWA GSQTFGPEAI AGMFAAIPFA IWFFLAIEGA AMAAEEAKDP KRTIPKAYIS GILTLVILAI GVMLFAGGVG DWRTLANIND PLPQAMKAVV GDSSGWLHML VWIGLFGLVA SFHGIIMGYS RQFFALARAG YLPASLARLS RFQTPHRAII AGGLIGIAAI YSDGLINLSG MTLTAAMITM AVFGAIVMYI MSMLSLFKLR KTEPGLERTF RAPGYPVVPG IALALAVVCL VAMAWFNALI GLIFLGLMAV GFIYFSLTAK LRADAPTDAM LTGE
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