Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1830 |
Symbol | |
ID | 3367339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2110600 |
End bp | 2112369 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652178 |
Product | ABC transporter, transmembrane region:ABC transporter |
Protein accession | YP_234915 |
Protein GI | 66045074 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCAC GGATTACCCG ACGTCATCGC CAGGCCTTGC GTCTGGCTGC GAGTTTCATC GCGCCGTATC GCTGGCAGGC GCTCGGCGCA TTGCTGGCAC TGGTCATTAC CGCGGGCATC ACCCTGTCGA TCGGGCAGGG CATCAAACTG ATGGTCGATC AGGGTTTCAT GACCCGTTCA CCGCAGTTGC TCGAGCGCTC GATCGGGTTT TTCATGCTGC TGACGGTCGG CCTCGCCGTC GGAACCTTCG CCCGTTTCTA TCTGGTGTCA TGGATCGGCG AGCGTGTGGT TGCCGACTTG CGCAAGAAGG TGTTCGATCA CCTGATCGAG CTGCATCCGG GCTTCTACGA GAACAATCGC AGTTCGGAAA TCCAGTCGCG ACTGACCGCC GACACCACGC TGTTGCAGTC GGTGATCGGC TCGTCACTGT CGATGTTCCT GCGCAATGCG CTGATGGTCA TCGGCGGCAT CGTGCTGTTG TTCATCACCA ATCCCAAACT CACCAGCATC GTGGTGGTGG CGTTACCGCT GATCATCGCG CCCATTCTCA TGTTCGGGCG GCGGGTACGA AACCTGTCGC GCGAGAGCCA GGACCGGGTC GCCAATGTGG GCAGCTACGT GGCCGAGGCC CTGGGGCAGA TCAAGACGGT GCAGGCCTAC AATCACCAGC AGCAGGACAA GCAGCGTTTC TCGCATACGG TGGAGCAGGC GTTCGAGACC GCTCGCAAAC GCATCCTGCA GCGTTCCTGG CTGATCACGC TGGTGATCGT CCTGGTGTTG GGTGCGGTGG CGGTGATGTT GTGGGTGGGC GGCATGGACG TGATCAGCGG CCGCATTTCC AGCGGTGAGC TGGCAGCGTT CGTGTTCTAC GCGCTGATGG TCGGCATGGC GTTCGGCACG TTGAGTGAGG TGATTGGCGA TCTGCAGCGC GCCGCCGGTG CCGCAGAGCG GATCGGCGAG CTGCTTCAGG CGCGCAGCGA GATCAGCGTG CCCACCACGG ACCTGCAGAG CCTGCCACCG CGCATCAGCG GGCGTCTGGC GCTTGAGAAT GTCACCTTCG CTTACCCGTC GCGTCCCGAG CGCAATGCAC TGGATAATTT GACCCTGAGC ATCGAGCCTG GTGAAACCCT GGCGCTGGTC GGACCCTCCG GAGCAGGCAA GTCGACCATC CTCGATCTGC TGTTGCGTTT TTACGACCCG ATTCAAGGGC GCATCCTGAT CGAGGGCGTG CCGATCGCGC AGCTCGATCA CCATGACCTG CGCCGCTGCT TCGCGCTGGT TTCACAATCG CCCGCGCTGT TTTTCGGCAC TGTCGAGGAC AACATTCGTT ACGGTAACGC CACTGCGAGC CTCGAGCAGG TGCAGGCGGC GGCGCGCATT GCCCATGCGC ATGAATTCAT TCTCGACATG GCCGACGGTT ACCGTACGCA TCTGGGTGAG GGCGGGGTGG GCTTGTCCGG CGGACAGCGG CAGCGTCTGG CGATTGCCCG AGCCTTGCTG GTCGATGCGC CGATTCTGTT GCTGGACGAG GCGACCAGTG CGCTGGACGC GCAGAGTGAG CACTTGATTC AACAGGCTCT GCCGAGCTTG ATGCAGGGGC GTACCACGCT GGTCATCGCC CACCGGCTGG CCACGGTGCA GAATGCCGAC CGGATTGCCG TCATGGATCA GGGGCGGTTG GTCGCGGTGG GCACCCATCA GCAGTTGATC GCCAGCAACC CGCTTTATGC GCGACTGGCG GCGTTGCAGT TCAATGCCGG GGTTGAGTAG
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Protein sequence | MISRITRRHR QALRLAASFI APYRWQALGA LLALVITAGI TLSIGQGIKL MVDQGFMTRS PQLLERSIGF FMLLTVGLAV GTFARFYLVS WIGERVVADL RKKVFDHLIE LHPGFYENNR SSEIQSRLTA DTTLLQSVIG SSLSMFLRNA LMVIGGIVLL FITNPKLTSI VVVALPLIIA PILMFGRRVR NLSRESQDRV ANVGSYVAEA LGQIKTVQAY NHQQQDKQRF SHTVEQAFET ARKRILQRSW LITLVIVLVL GAVAVMLWVG GMDVISGRIS SGELAAFVFY ALMVGMAFGT LSEVIGDLQR AAGAAERIGE LLQARSEISV PTTDLQSLPP RISGRLALEN VTFAYPSRPE RNALDNLTLS IEPGETLALV GPSGAGKSTI LDLLLRFYDP IQGRILIEGV PIAQLDHHDL RRCFALVSQS PALFFGTVED NIRYGNATAS LEQVQAAARI AHAHEFILDM ADGYRTHLGE GGVGLSGGQR QRLAIARALL VDAPILLLDE ATSALDAQSE HLIQQALPSL MQGRTTLVIA HRLATVQNAD RIAVMDQGRL VAVGTHQQLI ASNPLYARLA ALQFNAGVE
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