Gene Psyr_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1825 
Symbol 
ID3367334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2105845 
End bp2108055 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content64% 
IMG OID637652173 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_234910 
Protein GI66045069 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGGTTCTTGC ACGTAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC 
CAGGCTCATG TGTTGAAGGC CCTGATCAAC GCGCTGGACA GCCAGCGCCT GCACCATGCC
TATCTGTTCA CCGGCACACG GGGCGTCGGC AAGACGACTA TCGCGCGGAT CATCGCCAAG
TGCCTGAACT GTGAAACCGG CATTACTTCG ACGCCCTGCG GCACCTGCTC GGTGTGCAAG
GAGATCGACG AGGGCCGGTT CGTCGACCTG ATCGAAATCG ACGCCGCCAG CCGCACCAAG
GTCGAAGACA CGCGCGAGCT GCTGGATAAC GTGCAGTACG CGCCCAGTCG CGGTCGCTTC
AAGGTCTACC TGATCGACGA AGTGCACATG CTTTCCAGCC ACTCGTTCAA CGCCTTGCTC
AAGACGCTTG AAGAGCCGCC GCCCTACGTC AAGTTCATCC TGGCCACCAC CGATCCGCAA
AAACTGCCGG CGACCATTCT GTCGCGCTGC CTGCAGTTCT CGTTGAAAAA CATGACGCCT
GAGCGCGTTG TCGAGCACCT CACCCACGTG CTGGGCGTCG AGAACGTGCC GTTCGAAGAC
GACGCGCTGT GGCTGCTCGG GCGCGCCGCC GACGGTTCGA TGCGTGATGC GATGAGCCTC
ACCGATCAGG CCATTGCCTT CGGTGAAGGC AAGGTCATGG CTGCCGATGT ACGTGCCATG
CTCGGCACGC TGGACCACGG CCAGGTCTTC GATGTACTGA CCGCGCTGCT GGAAGGCGAT
GCCCGCGGGG TGCTGGAGGC GGTACGCCAT CTGGCCGAGC AGGGCCCTGA CTGGAATGGC
GTGCTCTCGG AAATTCTCAA CGTGCTGCAC CGTGTGGCGA TTGCCCAGGC GCTGCCGGAA
GGCGTCGACA ACGGTCACGG CGATCGTGAC CGGGTGCTGG CCCTGGCGCA GGCCCTGCCT
GCCGAAGATG TGCAGTTTTA CTACCAGATG GGCTTGATTG GTCGTCGTGA CTTGCCACTG
GCCCCTGATC CGCGTGGCGG CTTCGAGATG GTCCTGCTGC GTATGCTGGC GTTTCGTCCT
GCCGACAGCG AGGACGCGCC GAGGCAGCCG CTAAAGCCAG TGGGGATCAG CCAGGCCACG
GTTGATTCCC GAAAAGCAGT GGCTGATGCG ACACCTGTTG CATCGGCAGC TCCCGCAGTG
TCGAGCGCCC CGGTGATGGC TGCGCCCGAC CCGTCCTTCG AAGCGCTGCC GCCTGCAGCG
GCGCCGAAGC CGCCCGCCGC CCGGCCAGAG CCCGCGGTGC AGCCGGAATC GAAGCCAGAG
CCACAAGCCG CGCCAGTCGA AGACCTCGAC CTGCCGTGGA ATGAGCCGAA ATCCCCGGCT
GCCGAACCCG CCGCCGAAAC TGCGCCTGAT ACCGATACCG CTGCCGAGCC AGTCGCCGAG
CCGGTTCTGG AGACCGTTTC CGAGCAGCCT GACCTGACGC CCATGCCGAC GCCTGCGCCC
GCCAGCCCGG TGCCGGCCGC ACCCGAGGCC GAGCCTGAGC AGCCGGTTGC CGAGCAGCAG
GACGCGCCGG CAATGCTCGA AGCCATCCCG GACTCTGCGT ATCTGTCCAC GCACACCGAT
TCGATGTCTT CCGACTCCGG GCCGATGGGG CGTGACGACG AACCGCCAGC GGATGATGAT
TACGTCGAGC CGGATATCGA CATAGACCCG GCGTCCTACA GCTATCTGGA CGAGCTGGCC
CACGAAAGTG TCGTCGAGCT TGAAGCCGTC GAGCCGGAGC CTGCTCCGGC CGCCAAACCG
GCCACCGGTC TTGCGGCCGA GTGGCTGGAC GTGTTCCCCA AGCTGCCGAT CTCCGGCATG
ACCGGCAGCA TCGCGGCCAA CTGCACATTG ATCTCGGTCG ATGGCGATAA CTGGCTGCTG
CACCTGGACC CGGCGCACAG CGCGCTGTTC AACTCGACTC AGCAGCGGCG TCTGAACGAT
GCGTTGAACC AGTACCATGG GCGCACGATC AATCTGAGTA TCGAGCTGAT CAAGCCCGAG
CAGGAAACCC CTGCGCAGGC CGCTTCACGG CTGCGTGCCG AGCGCCAGCG CCAGGCCGAA
GCCTCGATCC AGGCCGACCC GTACATCCAG CAGATGCTGC AACAGTTCGG CGCTGTGATC
CGGGAAGACA CGATCAAACC CGTTGACGCG CCTGCGGTGC AGGCTCAATA A
 
Protein sequence
MSYQVLARKW RPRSFREMVG QAHVLKALIN ALDSQRLHHA YLFTGTRGVG KTTIARIIAK 
CLNCETGITS TPCGTCSVCK EIDEGRFVDL IEIDAASRTK VEDTRELLDN VQYAPSRGRF
KVYLIDEVHM LSSHSFNALL KTLEEPPPYV KFILATTDPQ KLPATILSRC LQFSLKNMTP
ERVVEHLTHV LGVENVPFED DALWLLGRAA DGSMRDAMSL TDQAIAFGEG KVMAADVRAM
LGTLDHGQVF DVLTALLEGD ARGVLEAVRH LAEQGPDWNG VLSEILNVLH RVAIAQALPE
GVDNGHGDRD RVLALAQALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP
ADSEDAPRQP LKPVGISQAT VDSRKAVADA TPVASAAPAV SSAPVMAAPD PSFEALPPAA
APKPPAARPE PAVQPESKPE PQAAPVEDLD LPWNEPKSPA AEPAAETAPD TDTAAEPVAE
PVLETVSEQP DLTPMPTPAP ASPVPAAPEA EPEQPVAEQQ DAPAMLEAIP DSAYLSTHTD
SMSSDSGPMG RDDEPPADDD YVEPDIDIDP ASYSYLDELA HESVVELEAV EPEPAPAAKP
ATGLAAEWLD VFPKLPISGM TGSIAANCTL ISVDGDNWLL HLDPAHSALF NSTQQRRLND
ALNQYHGRTI NLSIELIKPE QETPAQAASR LRAERQRQAE ASIQADPYIQ QMLQQFGAVI
REDTIKPVDA PAVQAQ