| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1822 |
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| Symbol | |
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| ID | 3367331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2102041 |
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| End bp | 2103165 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637652170 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_234907 |
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| Protein GI | 66045066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00396347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGG ACATCATCAG ATTTTTCACA GACTCGCAAT TTCTGGGCAT ATCGCTCGCT
AACTGGATAC TGGCTATTTT TGCCTCGACC CTGAGTTTTA TTCTGGTCAG GGGCGTGATC
GGTTTTGTGC TCAGAAAGAT GCGTTCGCGT GCCCAGGCGC CCAGCACGCA TATGCGATAC
ATCGTGGTTC AGGTGCTGTC GGGCACCAGT AATACGTTAT TGCTGCTGGC TTCGATCCTG
ATCGGCATTG GCATGCTCGA TCTGCCGGAG CGCTGGCTCG GGCGGGTCAG CAGTCTGTGG
TTCGTGGTTG CGGCATTGCA GGTCGGGCTA TGGGCGAACC GGGCGATCGC GCTGGCGTTG
CAGCGCTACT TCGTGCGTCA CAACGCCGGC GGCACCTTTC AGGGCAGTGC GCTGGCCACG
TTGAGTCTGT GGGGCGCGAA GGTGTTGCTG TGGGCCACGG TGGTCATGGC GATGCTGTCC
AACGTCGGGG TCAATATCAC CGCGTTTGTC GCCAGCCTCG GGGTCGGCGG CATTGCGGTC
GCGCTGGCGG TGCAGAACAT TCTGGGCGAC GTGTTTGCCT CGCTGTCGAT TGCGGTGGAC
AAGCCTTTCG AGGTCGGCGA CTTCATCGTC GTCGGTGCGC TGTCCGGCAC GGTCGAGCAC
GTGGGCCTGA AGACCACACG GATCCGCAGC CTGGGTGGCG AGCAGATCGT GATGGCCAAC
GCCGACATGA TCAACAACAC CATCCAGAAC TACAAACGCT TGCAGGAACG ACGCATTGTC
TTTGAGTTCA GGCTGACCTA TGACTGCTCG GTCGATCAGA TAAGGGAAGT GCCGAAGAAA
GTCGAAGCGA TCATCAACGC GCAGAAACTT GCACGTTTCG ACCGTTCGCA TTTTCGGGGT
TTTGGCGAGA CATCACTGGA GTTCGAGACC GTTTTCATCG TGCTCGACCC CAGCTACAAC
GTCTATATGG ATGTGCAGCA GGCGATCAAT CTGGACATCA TGGAAGCCTT TGCCGAACTG
GATGTGCGTT TCGCGTTCCC GTCCCGCACG GTGTACGTGG CGTCCCTGCC ACCGGTTAAA
ACCGCTCGTC CGACTGCGCT TGAAGCAGCC GACGCGACGA CCTGA
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| Protein sequence | MEQDIIRFFT DSQFLGISLA NWILAIFAST LSFILVRGVI GFVLRKMRSR AQAPSTHMRY
IVVQVLSGTS NTLLLLASIL IGIGMLDLPE RWLGRVSSLW FVVAALQVGL WANRAIALAL
QRYFVRHNAG GTFQGSALAT LSLWGAKVLL WATVVMAMLS NVGVNITAFV ASLGVGGIAV
ALAVQNILGD VFASLSIAVD KPFEVGDFIV VGALSGTVEH VGLKTTRIRS LGGEQIVMAN
ADMINNTIQN YKRLQERRIV FEFRLTYDCS VDQIREVPKK VEAIINAQKL ARFDRSHFRG
FGETSLEFET VFIVLDPSYN VYMDVQQAIN LDIMEAFAEL DVRFAFPSRT VYVASLPPVK
TARPTALEAA DATT
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