Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1820 |
Symbol | |
ID | 3367328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2099672 |
End bp | 2100838 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652168 |
Product | hypothetical protein |
Protein accession | YP_234905 |
Protein GI | 66045064 |
COG category | [S] Function unknown |
COG ID | [COG4307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0779908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGCT TTTTCGAGCA ACTGAGTTCA CGCATCACCG CCCCATTTGT CGGCGAATCC AAACGTAACA GCAAGGTCTG GCAGTGCACC TGTGGCCAGT CGGTGTTTTT CCCCAATACC CAATGCCTGG CCTGTTCGGC AGCGCTGGGC TACCTGCCTG AGCAGGGACG CGTCGCTACC CTCGAAGCAG GGCCTGAGCC CACTACCTGG CGCTTGAGCG ATGAGCCGGG TGCCGGGCTG TATCGGCGTT GCGCCAACCT CGGCACTCCG GCAGCCTGTA ACTGGCTTTT TCCAGAGCAC AATGCCGGCG AATTCTGTGT CGCGTGCAGC CTCAATCACA CCATTCCCGA CCTGTCCGTG GTTGAAAACG GCGAGCGCTG GCGCAAGGTC GAGACCGCCA AACGGCGTCT GGTCGCACAG CTGATTTCCC TGGGCCTGCA GGTCATCCCC AAGACTGTCG ACGAAGAAAC CGGCCTGGCC TTCGATTTTG TCGGTGTCGA TCTGGAAGGC AACCTGCCAA CCACAGGCCA TGCCAACGGC CTGATCACCC TGAACATCGA AGAAGCCGAC GACGCACACC GCGAAGCGAT GCGTGTACAG ATGCACGAAC CCTATCGCAC CTTGCTCGGC CATTTCCGTC ATGAAGTCGG TCATTACTAC TGGGATCGGC TCATCGCCAA TACCCACTGG CAGGACAGCT ATCGCAACCT GTTCGGCGAC GAGCGCGCCA GCTATGCCGA CGCGCTCGAT CACCACTACA AGAACGGCGC GCCGGACAAC TGGCAGGAAA GCTTCGTCAG TGCCTACGCG ACCATGCATC CGTGGGAAGA CTGGGCCGAA ACCTGGGCGC ATTACCTGCA CATGATGGAT GCGGTCGACA CCGCGCTGGG GTTTGGCATG AGCGCTCGCG ACATGGAGCT CGATTACCAG CCGTTTCCGC TGGAAGTGCT CTACGACCCT CAGCATCCGG GCGGCCCGGC GTTCCTGTCG TTCGTCAATG CCTGGATCGA GCTGGCGAGC ATGCTCAACG AGCTGTCACG CAGCATGGGG CAGCCGGATT TCTATCCGTT CGTGCTGCCT CCAGCAGTCA TCGCCAAGCT GCACTTCATC CATCTGGTGA TTCAGGATGC CGGTGGCAAG GCCGATGAGG TTCTGCAGGC CCAGTAA
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Protein sequence | MYRFFEQLSS RITAPFVGES KRNSKVWQCT CGQSVFFPNT QCLACSAALG YLPEQGRVAT LEAGPEPTTW RLSDEPGAGL YRRCANLGTP AACNWLFPEH NAGEFCVACS LNHTIPDLSV VENGERWRKV ETAKRRLVAQ LISLGLQVIP KTVDEETGLA FDFVGVDLEG NLPTTGHANG LITLNIEEAD DAHREAMRVQ MHEPYRTLLG HFRHEVGHYY WDRLIANTHW QDSYRNLFGD ERASYADALD HHYKNGAPDN WQESFVSAYA TMHPWEDWAE TWAHYLHMMD AVDTALGFGM SARDMELDYQ PFPLEVLYDP QHPGGPAFLS FVNAWIELAS MLNELSRSMG QPDFYPFVLP PAVIAKLHFI HLVIQDAGGK ADEVLQAQ
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