Gene Psyr_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1820 
Symbol 
ID3367328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2099672 
End bp2100838 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content60% 
IMG OID637652168 
Producthypothetical protein 
Protein accessionYP_234905 
Protein GI66045064 
COG category[S] Function unknown 
COG ID[COG4307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0779908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCT TTTTCGAGCA ACTGAGTTCA CGCATCACCG CCCCATTTGT CGGCGAATCC 
AAACGTAACA GCAAGGTCTG GCAGTGCACC TGTGGCCAGT CGGTGTTTTT CCCCAATACC
CAATGCCTGG CCTGTTCGGC AGCGCTGGGC TACCTGCCTG AGCAGGGACG CGTCGCTACC
CTCGAAGCAG GGCCTGAGCC CACTACCTGG CGCTTGAGCG ATGAGCCGGG TGCCGGGCTG
TATCGGCGTT GCGCCAACCT CGGCACTCCG GCAGCCTGTA ACTGGCTTTT TCCAGAGCAC
AATGCCGGCG AATTCTGTGT CGCGTGCAGC CTCAATCACA CCATTCCCGA CCTGTCCGTG
GTTGAAAACG GCGAGCGCTG GCGCAAGGTC GAGACCGCCA AACGGCGTCT GGTCGCACAG
CTGATTTCCC TGGGCCTGCA GGTCATCCCC AAGACTGTCG ACGAAGAAAC CGGCCTGGCC
TTCGATTTTG TCGGTGTCGA TCTGGAAGGC AACCTGCCAA CCACAGGCCA TGCCAACGGC
CTGATCACCC TGAACATCGA AGAAGCCGAC GACGCACACC GCGAAGCGAT GCGTGTACAG
ATGCACGAAC CCTATCGCAC CTTGCTCGGC CATTTCCGTC ATGAAGTCGG TCATTACTAC
TGGGATCGGC TCATCGCCAA TACCCACTGG CAGGACAGCT ATCGCAACCT GTTCGGCGAC
GAGCGCGCCA GCTATGCCGA CGCGCTCGAT CACCACTACA AGAACGGCGC GCCGGACAAC
TGGCAGGAAA GCTTCGTCAG TGCCTACGCG ACCATGCATC CGTGGGAAGA CTGGGCCGAA
ACCTGGGCGC ATTACCTGCA CATGATGGAT GCGGTCGACA CCGCGCTGGG GTTTGGCATG
AGCGCTCGCG ACATGGAGCT CGATTACCAG CCGTTTCCGC TGGAAGTGCT CTACGACCCT
CAGCATCCGG GCGGCCCGGC GTTCCTGTCG TTCGTCAATG CCTGGATCGA GCTGGCGAGC
ATGCTCAACG AGCTGTCACG CAGCATGGGG CAGCCGGATT TCTATCCGTT CGTGCTGCCT
CCAGCAGTCA TCGCCAAGCT GCACTTCATC CATCTGGTGA TTCAGGATGC CGGTGGCAAG
GCCGATGAGG TTCTGCAGGC CCAGTAA
 
Protein sequence
MYRFFEQLSS RITAPFVGES KRNSKVWQCT CGQSVFFPNT QCLACSAALG YLPEQGRVAT 
LEAGPEPTTW RLSDEPGAGL YRRCANLGTP AACNWLFPEH NAGEFCVACS LNHTIPDLSV
VENGERWRKV ETAKRRLVAQ LISLGLQVIP KTVDEETGLA FDFVGVDLEG NLPTTGHANG
LITLNIEEAD DAHREAMRVQ MHEPYRTLLG HFRHEVGHYY WDRLIANTHW QDSYRNLFGD
ERASYADALD HHYKNGAPDN WQESFVSAYA TMHPWEDWAE TWAHYLHMMD AVDTALGFGM
SARDMELDYQ PFPLEVLYDP QHPGGPAFLS FVNAWIELAS MLNELSRSMG QPDFYPFVLP
PAVIAKLHFI HLVIQDAGGK ADEVLQAQ