Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1817 |
Symbol | |
ID | 3367325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2092279 |
End bp | 2095767 |
Gene Length | 3489 bp |
Protein Length | 1162 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652165 |
Product | SMC protein, N-terminal:structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge |
Protein accession | YP_234902 |
Protein GI | 66045061 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.445184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCTGA AGTGCATCAA GCTGGCGGGG TTCAAATCTT TCGTCGACCC CACCACGGTG AACTTCCCCA GCAACATGGC GGCTGTCGTC GGCCCCAATG GCTGTGGCAA ATCCAACATT ATCGACGCCG TGCGCTGGGT CATGGGCGAA AGCTCGGCCA AGAACCTGCG CGGCGAGTCG ATGACCGACG TCATCTTCAA CGGCTCCACC AGCCGCAAGC CGGTGAGCCA GGCCAGCATC GAGCTGGTCT TCGATAACTC CGACGGCACG CTGGTGGGCG AGTACGCGGC GTATGCGGAA ATCTCCATTC GCCGCAAAGT GACCCGCGAC AGCCAGAACA GCTACTACCT CAACGGCACC AAATGCCGCC GTCGCGACAT CACCGACATC TTCCTCGGCA CCGGCCTGGG GCCACGCAGT TATTCGATCA TCGAACAGGG CATGATCTCC AAGCTGATCG AAGCCAAGCC CGAAGACCTG CGCAACTTCA TCGAAGAAGC CGCAGGGATT TCCAAGTACA AGGAGCGGCG TCGGGAAACC GAAAACCGCA TTCGTCGTAC CCATGAGAAC CTGGCGCGCC TGACCGACCT GCGTGAAGAA CTCGAGCGTC AGCTGGAGCG TCTGCACCGG CAGGCTCAGG CGGCCGAGAA ATATCAGGAA TACAAGGCCG AAGAACGCCA GCTGAAAGCG CAATTGTCGG CCCTGCGCTG GCAGGCGCTG AATGATCTGG TGGGTCAGCG CGAGGCGGTG ATCAGCAATC AGGAGGTCGG TTTCGAGGCG CTGGTGGCCG ATCAGCGAAG CGCCGATGCC AGTATCGAAA GGCTGCGCGA CGGCCACCAT GACCTGTCCG AACGCTTCAA CCTGGTGCAG GGCCGCTTTT ATTCGGTCGG CGGCGACATT GCCCGCGTCG AGCAGAGCAT TCAGCACGGT CAGCAGCGGC TGCGCCAATT GCAGGATGAC CTGCGTGAAG CCGAACGTGC CCGCCAGGAA ACCGAATCGC ACCTTGGGCA CGACACCACG TTGCTTGCCA CCCTCGGCGA AGAGCTGGAG ATGCTCGAGC CCGAACAGGA AATGACCAGC GCCGCCGCCG AGGAGTCGGC CATCGCTCTG GAAGACGCCG AAGCGGCCAT GCAGGGCTGG CAGGAGAAGT GGGACGTCTT CAATCAGCAA TCCGCCGAGC CGCAGCGTCA GGCACAGGTC CAGCAGTCAC GCATTCAGCA ACTGGAACAG AGCATCGAAC GCCTGGCCGA GCGCCAGCGG CGTCTGGCCG AAGAGCGTCA ACTGCTGGCC GCGGACCCGG AAGATGCGGC CATTCTGCAA TTGAGCGAAG ACCTCGCCAC CCGCGACATG ACCCTTGAAG AGCTGCACAT GGGCGAAGAG CAGGCGGTCG AGCGTCTTGA GCAATTGCGC GAGGCGTTGC AGCACGCCAG TCAGGCGCAA CAGCAGGCGC AGGGCGAACT GCAACGTCTC AACGGCCGGC TGGCGTCCCT CGAAGCGTTG CAACAGGCGG CACTTGACCC GGACACCGGC ACCGCCGAGT GGCTGCGTGA TCAGCAACTG GCCGAGCGAC CGCGTCTGGC CGAGGGGCTG AGCGTCGAAG CCGGCTGGGA ACTGGCCGTG GAAACTGTGC TGGGTGCCGA TTTGCAGGCC GTGCTGGTCG ATGACTTCGA CGGGCTCGAT CTGGCCAATT TCGAACAGGG CGATCTGCGT TTGCTCAGCG CGGGTGCCGA CACGATTCGC GCGCCGGGCA GCTTGCTGGA AAAGGTCGAC AGCACGGTCG ACCTGTCGGC CTGGCTGGGC CAGGTGATTC CGGTCGAGAA CCTGGATGAG GCGCTGGCGC GACGCGCACA ACTCAGTGCC GGGCAAAGCC TGATCAGCCG TGACGGCTAC TGGGTGGGGC GGCACTTTTT ACGTGTCCGC CGCGCCAGCG AAGCGCAGAG CGGTGTGCTG GCGCGCGGTC AGGAATTGCA GCGGCTGAGT CTGGAGCGCG ATGAGCGCGA AGCGACGCTG GCCACTTTGG AAGAGCAATT ACTGGTCTTG CGCGAGCAGC AGTCGCAGCA GGAAGACGCT CGTGAGCAGT TGCGCCGTCG CGTGCAGGAC GAAACCCGTC AGCAAAGCGA ACTGAAAGCG CAGCTGTCGG CGGTCCGGGT AAAAGTCGAG CAGTTGACCC TGCGCCGCAC CCGCCTTGAT GAAGAACTGG CCGAGCTGGG CGAGCAGCGC GCGGTCGAGC ACGAACACCT TGGCGAATCG CGCCTGCAAT TGCAGGACGC ACTGGACAGC ATGGCGCAGG ATACCGAGCA GCGCGAAGTG CTGCAGGCCC AGCGTGATGC GCTGCGTGAG CGTCTGGACC GGATACGTCA GGACGCGCGG CAACACAAGG ATCACAGTCA TCAACTGGCG GTGCGTCTGG GCTCGATCAA GGCGCAATAC GATTCGACCC GTCAGGCGCT GGAGCGCCTG CGCATGCAGT CCGAAAGGCT TACCGAGAAG CGTGAGCAAC TGAGCCTGAA TCTGGAGGAG GGCGAGGCAC CGCTCGAAGA GCTGCGCCTC AAGCTTGAAG AGCTGCTGGA GCGGCGCATG GTGGTCGATG ACGAAATGCG CATCGCCAAG AACGCACTCG AAGACGCTGA TCGCGAATTG CGTGAGGCAG AAAAACGTCG CACCCAGGCC GAGCAGCAAT CGCAACTGCT GCGTGGCCAG CTGGAACAGC AGCGTCTGGA GTGGCAGGCG CTGACGGTGC GTCGCAAAGC CTTGCAGGAC CAGTTGCATG AGGACGGCTA CGACCTGCAT GGCGTGCTCG CCACGCTGAC GCCGGAAGCC AGCGAACAGG CTGCCGAGCA GCAACTGGAA AGCATCGCCG GGCGTATTCA GCGCCTGGGC GCAATCAACC TCGCGGCCAT CGACGAGTAT CAGCAGCAGT CCGAGCGCAA GCGCTATCTG GATGCGCAGG ATGCCGATCT GGTCGAAGCG CTGGACACCC TGGAAAACGT CATCCGCAAG ATCGACAAGG AGACGCGAAA CCGCTTCAAG GATACCTTCG ATCAGATAAA CAGCGGAATT CAGGCACTTT TCCCAAAAGT TTTCGGTGGT GGCTCCGCTT ATTTGGAACT GACAGGCGAA GATTTACTCG ATACTGGGGT GACAATCATG GCGCGTCCCC CTGGCAAGAA GAACAGCACC ATCCATTTGC TCTCGGGTGG TGAAAAAGCC CTGACCGCGC TGGCGCTGGT GTTTGCCATT TTCAAACTCA ATCCTGCGCC GTTTTGCATG CTTGACGAGG TGGATGCGCC GCTGGATGAC GCCAACGTGG GGCGCTATGC ACGATTGGTG AAAGAAATGT CACAAACGGT GCAGTTCATC TACATCACCC ACAACAAGAT CGCCATGGAA ATGGCCGATC AACTGATGGG GGTGACGATG CACGAGCCCG GTTGTTCGCG GCTGGTAGCT GTGGATGTGG AGCAGGCGAT GGCGCTGGTT GATGCCTGA
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Protein sequence | MRLKCIKLAG FKSFVDPTTV NFPSNMAAVV GPNGCGKSNI IDAVRWVMGE SSAKNLRGES MTDVIFNGST SRKPVSQASI ELVFDNSDGT LVGEYAAYAE ISIRRKVTRD SQNSYYLNGT KCRRRDITDI FLGTGLGPRS YSIIEQGMIS KLIEAKPEDL RNFIEEAAGI SKYKERRRET ENRIRRTHEN LARLTDLREE LERQLERLHR QAQAAEKYQE YKAEERQLKA QLSALRWQAL NDLVGQREAV ISNQEVGFEA LVADQRSADA SIERLRDGHH DLSERFNLVQ GRFYSVGGDI ARVEQSIQHG QQRLRQLQDD LREAERARQE TESHLGHDTT LLATLGEELE MLEPEQEMTS AAAEESAIAL EDAEAAMQGW QEKWDVFNQQ SAEPQRQAQV QQSRIQQLEQ SIERLAERQR RLAEERQLLA ADPEDAAILQ LSEDLATRDM TLEELHMGEE QAVERLEQLR EALQHASQAQ QQAQGELQRL NGRLASLEAL QQAALDPDTG TAEWLRDQQL AERPRLAEGL SVEAGWELAV ETVLGADLQA VLVDDFDGLD LANFEQGDLR LLSAGADTIR APGSLLEKVD STVDLSAWLG QVIPVENLDE ALARRAQLSA GQSLISRDGY WVGRHFLRVR RASEAQSGVL ARGQELQRLS LERDEREATL ATLEEQLLVL REQQSQQEDA REQLRRRVQD ETRQQSELKA QLSAVRVKVE QLTLRRTRLD EELAELGEQR AVEHEHLGES RLQLQDALDS MAQDTEQREV LQAQRDALRE RLDRIRQDAR QHKDHSHQLA VRLGSIKAQY DSTRQALERL RMQSERLTEK REQLSLNLEE GEAPLEELRL KLEELLERRM VVDDEMRIAK NALEDADREL REAEKRRTQA EQQSQLLRGQ LEQQRLEWQA LTVRRKALQD QLHEDGYDLH GVLATLTPEA SEQAAEQQLE SIAGRIQRLG AINLAAIDEY QQQSERKRYL DAQDADLVEA LDTLENVIRK IDKETRNRFK DTFDQINSGI QALFPKVFGG GSAYLELTGE DLLDTGVTIM ARPPGKKNST IHLLSGGEKA LTALALVFAI FKLNPAPFCM LDEVDAPLDD ANVGRYARLV KEMSQTVQFI YITHNKIAME MADQLMGVTM HEPGCSRLVA VDVEQAMALV DA
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