Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1812 |
Symbol | |
ID | 3367320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2085204 |
End bp | 2086538 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652160 |
Product | guanine deaminase |
Protein accession | YP_234897 |
Protein GI | 66045056 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00974317 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACA ACGAGAGTGC CATGAGTTCA GTTTCCCGCC GTAAAGCCTA CCGCGCCGCC ATCGTTCACA GCCTAGCCGA CCCGGCCGAA GTGGCGCTGG AGGCATCCTG TGAATACTTT GCCGACGGCT TGCTGCTGGT CGAGGACGGC AAGATCGTTT CGGTGGGTCA CGCTGCCGAT CTGCTGGGGC GGCTCGACGA CGATGTCGAG TTGATCGAGT ACACGGACGC ACTGATAACA CCGGGGTTCA TCGACACCCA TATTCACTTG CCGCAAACCG GCATGATCGG CTCCTACGGC GAGCAATTGC TGGACTGGCT CAACACCTAC ACCTTCCCCT GCGAAAGTCA GTTCGCCGAC CCCGCGCATT CGGCGCAGGT GGCCGACATC TTCATCAAGG AGCTGCTGCG CAACGGCACC ACCACGGCGC TGGTGTTCGG CAGCGTGCAC AAGGAATCGG TCGAGGCGTT TTTCAGCGCG GCCCAGGCAC TTGATCTGCG CATGATCGCC GGCAAGGTGA TGATGGACCG CAATGCGCCG GATTATCTGG TCGATACGCC AGAATCCGGG TATGCCGACA GCAAGGCACT GATCGAGCGC TGGCATGGCA AAGGTCGTTT GAGTTACGCA GTGACGCCGC GATTCGCGCC GACCAGCAGC CCGGAGCAAT TGAGCCTGGC CGGCCAGTTG CTCACCGAGT ATCCCGGCCT GTACCTGCAG ACCCACATCA GCGAGAACCT TCAGGAGATC GAGTGGGTCA AGGCGCTGTT CCCGGAGCGC AAGCATTACC TGGACGTCTA CGATCACTTC AACCTGCTAG GCGAGCGCTC GGTGTTCGCC CATGGCGTTC ACCTGTGCGA CGAACAATGC GCCCGACTGG CGCAGGCCGG TTCGGCGATT GCCTTCTGCC CGACCTCCAA CCTGTTTTTG GGCAGCGGCC TGTTCAACCT GCCGATGGCC GAGAAGCACA AGGTGAATGT CGGTCTGGGC ACCGACGTGG GCGGCGGCAC CAGCTTTTCG ATTCTGCAGA CCCTGAACGA GGCCTACAAG GTCATGCAGA TGCAGGGCGC ACGGCTCAAT CCGTTCAAGT CACTGTACCT GGCAACGCTG GGCGGCGCGC GGGCGCTGCG TCTGGAAGAC AAGGTCGGCA GCCTGAAGCC CGGCAACGAG GCCGACTTCC TGGTGCTCGA CTACAACGCC ACCCCACTGC TGTCGTATCG CTTGAAGCAG GCGAAGACTA TCGAAGAGAT TCTGTTCGTG CTGATGACCA TCGGTGACGA CCGGACGGTG AAGCAGACCT GGTCGGGTGG GCGATTGGTG CATGACAGAG GCTAG
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Protein sequence | MSHNESAMSS VSRRKAYRAA IVHSLADPAE VALEASCEYF ADGLLLVEDG KIVSVGHAAD LLGRLDDDVE LIEYTDALIT PGFIDTHIHL PQTGMIGSYG EQLLDWLNTY TFPCESQFAD PAHSAQVADI FIKELLRNGT TTALVFGSVH KESVEAFFSA AQALDLRMIA GKVMMDRNAP DYLVDTPESG YADSKALIER WHGKGRLSYA VTPRFAPTSS PEQLSLAGQL LTEYPGLYLQ THISENLQEI EWVKALFPER KHYLDVYDHF NLLGERSVFA HGVHLCDEQC ARLAQAGSAI AFCPTSNLFL GSGLFNLPMA EKHKVNVGLG TDVGGGTSFS ILQTLNEAYK VMQMQGARLN PFKSLYLATL GGARALRLED KVGSLKPGNE ADFLVLDYNA TPLLSYRLKQ AKTIEEILFV LMTIGDDRTV KQTWSGGRLV HDRG
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