Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1811 |
Symbol | |
ID | 3367319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2083963 |
End bp | 2084712 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652159 |
Product | transcriptional regulator GntR |
Protein accession | YP_234896 |
Protein GI | 66045055 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.148562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC AGTCCCTGCC TCTCAAGAAA CAGCCGCGCA GCCTAGGTTC AAGCCGTAAC GTCACGCAGG ACGATGTCGT TTACGAGCAT GTTTTCGATG CCATTCTGGA ACAGCGGCTG GCGCCGGGCA CCAAACTGAG TGAAGAGGCG CTGGGCGAGA TTTTCGGTGT CAGCCGCACC ATCATTCGTC GCGCCCTGTC GCGGTTGGGC CATGAGGGCG TCGTGCTGTT GCGCCCCAAC CGTGGCGCGG TGGTCGCCAG CCCCAGCGTC GAAGAGGCGC GTCAGGTGTT TTTCGCGCGG CGCATGGTCG AGAAGGCAAT CACTGAACTG GCGGTCGAGC ACGCCACTGC CGAGCAACTG GCCGAGCTGC GCCAGATGGT CAGCGACGAG CGCGACAGCT TCGCTCGCGG TGATCGGGGC GCCGGTATTC GTTTGTCCGG CGAGTTTCAC CTCCAGTTGG CCGTGGCCGC GAGAAACGCG CCGCTGATCA GCTTCCAGCG CAGCCTGGTG TCGCAGACCT CACTGATCAT TGCCCAGTAC GAAACCGGCA ATCGCACGCA TTGTTCCTAC GATGAGCACA ACCAGTTGAT CGACGCCATC GAAGCCCGCA ATGCAGCGCT GGCCGTCGAA CTGATGATGC ATCACATGGA CCACATCGAC AGCAAGCTCA ACCTTGACGA AGACAGCGCC TCGGATGATT TGCATGCGGT GTTCTCGCAC GTCATGGGCC GGAAAAAGCC GGTGCGTTGA
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Protein sequence | MNDQSLPLKK QPRSLGSSRN VTQDDVVYEH VFDAILEQRL APGTKLSEEA LGEIFGVSRT IIRRALSRLG HEGVVLLRPN RGAVVASPSV EEARQVFFAR RMVEKAITEL AVEHATAEQL AELRQMVSDE RDSFARGDRG AGIRLSGEFH LQLAVAARNA PLISFQRSLV SQTSLIIAQY ETGNRTHCSY DEHNQLIDAI EARNAALAVE LMMHHMDHID SKLNLDEDSA SDDLHAVFSH VMGRKKPVR
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