Gene Psyr_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1808 
Symbol 
ID3367316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2081657 
End bp2082172 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content61% 
IMG OID637652156 
Producthypothetical protein 
Protein accessionYP_234893 
Protein GI66045052 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT TCAAGACACT GACACCTTCA AGCCTGGGCC GGGATGCGTT CATCGCGGCC 
TTTGCCGATA TCTACGAACA CTCACCGTGG GTCGCGCAGC AGGCGTTCGA CCAAAGCACA
GGCGCGCAAC TCGATCAGGT CGAGACCCTG CATGCGCGCA CGAGCGCGAT CCTGCTGGGT
GCCACTCACG AGCAACAACT GGCACTGATC AATGCCCACC CGGACCTGGC GGGCAAGGCT
GCCGTTCGAG GCGAGCTGAC TCAGGCCAGT ACCGATGAAC AGGCCGGCGC CGGTATCCAC
CATTGCACGC CTGAGGAGTT CCAGCGCTTT ACCGAGCTGA ACGAGGCTTA CAAGGCCCGC
TTCGGCTTTC CGTTCATCAT GGCGGTCAAG GGCAGCGACA GGCATAAGAT TCTGGCGGCG
TTCGAGCAAC GCATTCACCA CTCGCTCGAG GCCGAGTTCG CTTGCGCCCT GTCCGAGATC
AACAAGATCG CACTGTTTCG TCTACAGGCG CTTTGA
 
Protein sequence
MSTFKTLTPS SLGRDAFIAA FADIYEHSPW VAQQAFDQST GAQLDQVETL HARTSAILLG 
ATHEQQLALI NAHPDLAGKA AVRGELTQAS TDEQAGAGIH HCTPEEFQRF TELNEAYKAR
FGFPFIMAVK GSDRHKILAA FEQRIHHSLE AEFACALSEI NKIALFRLQA L