Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1805 |
Symbol | |
ID | 3367313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2078608 |
End bp | 2079900 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652153 |
Product | hypothetical protein |
Protein accession | YP_234890 |
Protein GI | 66045049 |
COG category | [S] Function unknown |
COG ID | [COG3748] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.916296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCAC ATATGATGGA ATGGCTGAAT CTGGGCGTGC GCTGGATTCA CATGATTGTC GGCGTCGCCT GGATCGGCGC ATCGTTCTAC TTCGTCTGGC TGGAGAACAA CCTCAACCGC AGCAACCCGC GTGAAGGCCT GTCGGGTGAT CTGTGGGCGA TCCACGGCGG CGGCATCTAC CACCTGGAGA AGTACAAGCT CGCACCACCG ACCATGCCGG AGAATCTGCA CTGGTTCAAA TGGGAAGCCT ATTCGACCTG GCTATCAGGG GTCGCGCTGT TGTGCGTGGT GTTCTACGCC AACCCGACGC TGTACCTGCT GGCACCGGGC AGCAGCCTGA GTGGCGCCGA GGGTGTGCAC ATCGGCCTGG GTTCGTTGTT CGTCGGCTGG TTCATCTACA GTTTTCTGTG TGACTCGCCA CTGGGCAAGC GCCCTGCCCT GTTGGGCGTG GTCCTGTTCG TGCTGCTGGT GGCGGCGGCG TACGGGTTCA GCAAAGTATT CAGCGGTCGC GGTGCCTACC TGCATGTGGG CGCGATCATG GGCACCATCA TGGTCGGCAA CGTGTTCCGC GTCATCATGC CGGCCCAGCG CGCGCTGGTG GCCGCGATTG CCGAGAACCG TACGCCGGAC CCAAGCCTGC CGGCAAAAGG CCTGTTGCGT TCACGACACA ACAACTACTT CACCCTGCCC GTGCTGTTCA TCATGATCAG CAATCACTTT CCAAGCACCT ACGGCAGTGA GTACAACTGG CTGATTCTCG CCGGCATCGC GCTGCTGGCC GTGCTGGTGC GCCATTACTT CAATACACGA CACGACAGCC ATCGATTCGC CTGGACCCTG CCGGTCGCGG CGCTGGGCAT GCTGTGCCTG GCGTATGTCA CCGGCCCTGC GCAACCGCCA GCCAAGATCG TCTATCAGCC ACTGCCCGGT ACGGCGGTCG GCGGTCATCG GGCTGATGAG CAACCTGCGC AACCCGCCGC TGCGCCTGCC CAGGCAGCGC CTGCTCCGCC CGAGCCTGCC AAGGTGGCAG GTACAGACTT CAACAAGGTG CACGACGTCA TCCGGCAACG TTGTTCGGTC TGTCACTCGG CCACGCCTAC CAGCCAGCTG TTCAGCGTCG CTCCGGCCGG TGTGATGTTC GATACGCCTG AACAGATCCA GCAACAGGCG CCGCGCATCA AGGCGCAGGC AATCACCGCG CCGATCATGC CACTGGGCAA TATCACCCAG ATGACCCAGC AGGAACGTGA TCTGGTAGGC GCCTGGATCG ATCAGGGCGC ACACATCAAC TGA
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Protein sequence | MLAHMMEWLN LGVRWIHMIV GVAWIGASFY FVWLENNLNR SNPREGLSGD LWAIHGGGIY HLEKYKLAPP TMPENLHWFK WEAYSTWLSG VALLCVVFYA NPTLYLLAPG SSLSGAEGVH IGLGSLFVGW FIYSFLCDSP LGKRPALLGV VLFVLLVAAA YGFSKVFSGR GAYLHVGAIM GTIMVGNVFR VIMPAQRALV AAIAENRTPD PSLPAKGLLR SRHNNYFTLP VLFIMISNHF PSTYGSEYNW LILAGIALLA VLVRHYFNTR HDSHRFAWTL PVAALGMLCL AYVTGPAQPP AKIVYQPLPG TAVGGHRADE QPAQPAAAPA QAAPAPPEPA KVAGTDFNKV HDVIRQRCSV CHSATPTSQL FSVAPAGVMF DTPEQIQQQA PRIKAQAITA PIMPLGNITQ MTQQERDLVG AWIDQGAHIN
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