Gene Psyr_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1805 
Symbol 
ID3367313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2078608 
End bp2079900 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content62% 
IMG OID637652153 
Producthypothetical protein 
Protein accessionYP_234890 
Protein GI66045049 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.916296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCAC ATATGATGGA ATGGCTGAAT CTGGGCGTGC GCTGGATTCA CATGATTGTC 
GGCGTCGCCT GGATCGGCGC ATCGTTCTAC TTCGTCTGGC TGGAGAACAA CCTCAACCGC
AGCAACCCGC GTGAAGGCCT GTCGGGTGAT CTGTGGGCGA TCCACGGCGG CGGCATCTAC
CACCTGGAGA AGTACAAGCT CGCACCACCG ACCATGCCGG AGAATCTGCA CTGGTTCAAA
TGGGAAGCCT ATTCGACCTG GCTATCAGGG GTCGCGCTGT TGTGCGTGGT GTTCTACGCC
AACCCGACGC TGTACCTGCT GGCACCGGGC AGCAGCCTGA GTGGCGCCGA GGGTGTGCAC
ATCGGCCTGG GTTCGTTGTT CGTCGGCTGG TTCATCTACA GTTTTCTGTG TGACTCGCCA
CTGGGCAAGC GCCCTGCCCT GTTGGGCGTG GTCCTGTTCG TGCTGCTGGT GGCGGCGGCG
TACGGGTTCA GCAAAGTATT CAGCGGTCGC GGTGCCTACC TGCATGTGGG CGCGATCATG
GGCACCATCA TGGTCGGCAA CGTGTTCCGC GTCATCATGC CGGCCCAGCG CGCGCTGGTG
GCCGCGATTG CCGAGAACCG TACGCCGGAC CCAAGCCTGC CGGCAAAAGG CCTGTTGCGT
TCACGACACA ACAACTACTT CACCCTGCCC GTGCTGTTCA TCATGATCAG CAATCACTTT
CCAAGCACCT ACGGCAGTGA GTACAACTGG CTGATTCTCG CCGGCATCGC GCTGCTGGCC
GTGCTGGTGC GCCATTACTT CAATACACGA CACGACAGCC ATCGATTCGC CTGGACCCTG
CCGGTCGCGG CGCTGGGCAT GCTGTGCCTG GCGTATGTCA CCGGCCCTGC GCAACCGCCA
GCCAAGATCG TCTATCAGCC ACTGCCCGGT ACGGCGGTCG GCGGTCATCG GGCTGATGAG
CAACCTGCGC AACCCGCCGC TGCGCCTGCC CAGGCAGCGC CTGCTCCGCC CGAGCCTGCC
AAGGTGGCAG GTACAGACTT CAACAAGGTG CACGACGTCA TCCGGCAACG TTGTTCGGTC
TGTCACTCGG CCACGCCTAC CAGCCAGCTG TTCAGCGTCG CTCCGGCCGG TGTGATGTTC
GATACGCCTG AACAGATCCA GCAACAGGCG CCGCGCATCA AGGCGCAGGC AATCACCGCG
CCGATCATGC CACTGGGCAA TATCACCCAG ATGACCCAGC AGGAACGTGA TCTGGTAGGC
GCCTGGATCG ATCAGGGCGC ACACATCAAC TGA
 
Protein sequence
MLAHMMEWLN LGVRWIHMIV GVAWIGASFY FVWLENNLNR SNPREGLSGD LWAIHGGGIY 
HLEKYKLAPP TMPENLHWFK WEAYSTWLSG VALLCVVFYA NPTLYLLAPG SSLSGAEGVH
IGLGSLFVGW FIYSFLCDSP LGKRPALLGV VLFVLLVAAA YGFSKVFSGR GAYLHVGAIM
GTIMVGNVFR VIMPAQRALV AAIAENRTPD PSLPAKGLLR SRHNNYFTLP VLFIMISNHF
PSTYGSEYNW LILAGIALLA VLVRHYFNTR HDSHRFAWTL PVAALGMLCL AYVTGPAQPP
AKIVYQPLPG TAVGGHRADE QPAQPAAAPA QAAPAPPEPA KVAGTDFNKV HDVIRQRCSV
CHSATPTSQL FSVAPAGVMF DTPEQIQQQA PRIKAQAITA PIMPLGNITQ MTQQERDLVG
AWIDQGAHIN